RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJEB4632" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJEB4632 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3887688 3887688 PRJEB4632_P_NODE_724_length_256_cov_3.092896_g686_i0 PRJEB4632 724 256 3.092896 7.91781376 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 185 2.2e-42   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g686 i0 81.349 3.83203125 252 26 98 10 5 255 4008 3777 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 981 185 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
3887692 3887692 PRJEB4632_P_NODE_884_length_245_cov_3.866279_g846_i0 PRJEB4632 884 245 3.866279 9.47238355 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 169 2.1e-37   NTclustered gi|2651357797|gb|PP174310.1| 1979794 g846 i0 79.921 65.0530612244898 254 31 100 17 1 245 4106 4348 Cercomonas sp. isolate 1-1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15938 169 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
10264390 10264390 PRJEB4632_P_NODE_1069_length_213_cov_6.207143_g1031_i0 PRJEB4632 1069 213 6.207143 13.22121459 Placocista sp. CC-Grouse Mountain 741089 SAR_Eukaryotes SAR_Eukaryotes 270 4.75e-68   NTclustered gi|290760485|gb|GQ144688.1| 741089 g1031 i0 89.593 79.7934272300469 221 11 100 8 1 213 1860 1644 Placocista sp. CC-Grouse Mountain large subunit ribosomal RNA gene, partial sequence blastn 16996 270 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Placocista Placocista sp. CC-Grouse Mountain
10264398 10264398 PRJEB4632_P_NODE_429_length_335_cov_2.736641_g391_i0 PRJEB4632 429 335 2.736641 9.16774735 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 547 3.3099999999999984e-151   NTclustered gi|238617605|gb|FJ973380.1| 45107 g391 i0 96.119 100.358208955224 335 13 100 0 1 335 1579 1245 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 33620 547 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
11539791 11539791 PRJEB4632_P_NODE_1050_length_226_cov_4.836601_g1012_i0 PRJEB4632 1050 226 4.836601 10.93071826 Placocista sp. CC-Grouse Mountain 741089 SAR_Eukaryotes SAR_Eukaryotes 339 1.3799999999999998e-88   NTclustered gi|290760485|gb|GQ144688.1| 741089 g1012 i0 93.805 99.3495575221239 226 13 100 1 1 226 2042 1818 Placocista sp. CC-Grouse Mountain large subunit ribosomal RNA gene, partial sequence blastn 22453 339 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Placocista Placocista sp. CC-Grouse Mountain
17913086 17913086 PRJEB4632_P_NODE_1035_length_229_cov_2.660256_g997_i0 PRJEB4632 1035 229 2.660256 6.09198624 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 189 1.49e-43   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g997 i0 81.974 29.5021834061135 233 32 100 9 1 229 3994 3768 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 6756 189 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
20462428 20462428 PRJEB4632_P_NODE_377_length_362_cov_5.813149_g339_i0 PRJEB4632 377 362 5.813149 21.04359938 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 294 5.17e-75   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g339 i0 82.535 55.8453038674033 355 43 97 15 1 350 3658 3998 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 20216 294 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
20462433 20462433 PRJEB4632_P_NODE_677_length_267_cov_2.716495_g639_i0 PRJEB4632 677 267 2.716495 7.25304165 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 222 1.76e-53   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g639 i0 82.657 17.4007490636704 271 27 100 11 1 267 3994 3740 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4646 222 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
24287381 24287381 PRJEB4632_P_NODE_1040_length_228_cov_2.948387_g1002_i0 PRJEB4632 1040 228 2.948387 6.72232236 Placocista sp. CC-Grouse Mountain 741089 SAR_Eukaryotes SAR_Eukaryotes 171 5.38e-38   NTclustered gi|290760485|gb|GQ144688.1| 741089 g1002 i0 80.87 21.5350877192982 230 33 100 11 1 228 2373 2153 Placocista sp. CC-Grouse Mountain large subunit ribosomal RNA gene, partial sequence blastn 4910 171 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Placocista Placocista sp. CC-Grouse Mountain

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;