RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB4632" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 2 ✖

bioproject 1

  • PRJEB4632 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5163909 5163909 PRJEB4632_P_NODE_245_length_481_cov_2.495098_g207_i0 PRJEB4632 245 481 2.495098 12.00142138 Caudoviricetes sp. 2832643 Viruses Viruses 839 0   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g207 i0 98.133 392.806652806653 482 8 100 1 1 481 18403 17922 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 188940 839 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5163924 5163924 PRJEB4632_S_NODE_5_length_575_cov_66.146296_g4_i0 PRJEB4632 5 575 66.146296 380.341202 Caudoviricetes sp. 2832643 Viruses Viruses 93.5 3.34e-14   NTclustered gi|2914955111|gb|OR221941.1| 2832643 g4 i0 98.113 9.76695652173913 53 1 9 0 1 53 82580 82528 MAG: Caudoviricetes sp. isolate MSP0186 genomic sequence blastn 5616 93.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;