contig_metadata
46 rows where analysis = "blastn", bioproject = "PRJEB43370" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60239 | 60239 | PRJEB43370_P_NODE_641_length_539_cov_3.924490_g599_i0 | PRJEB43370 | 641 | 539 | 3.92449 | 21.1530011 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 974 | 0 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g599 | i0 | 99.258 | 513.979591836735 | 539 | 4 | 100 | 0 | 1 | 539 | 78526 | 77988 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 277035 | 974 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 989947 | 989947 | PRJEB43370_P_NODE_6241_length_183_cov_2.432836_g6198_i0 | PRJEB43370 | 6241 | 183 | 2.432836 | 4.45208988 | Aeromonas | 642 | Bacteria | Bacteria | 339 | 1.07e-88 | NTclustered | gi|2209819103|gb|CP093309.1| | 644 | g6198 | i0 | 100 | 212.726775956284 | 183 | 0 | 100 | 0 | 1 | 183 | 4258025 | 4258207 | Aeromonas hydrophila strain AC133 chromosome, complete genome | blastn | 38929 | 339 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas hydrophila | ||
| 2265174 | 2265174 | PRJEB43370_P_NODE_10982_length_162_cov_0.920354_g10939_i0 | PRJEB43370 | 10982 | 162 | 0.920354 | 1.49097348 | Undibacterium | 401469 | Bacteria | Bacteria | 228 | 2.0899999999999995e-55 | NTclustered | gi|1798093821|dbj|AP018439.1| | 2058624 | g10939 | i0 | 91.975 | 79.0308641975309 | 162 | 13 | 100 | 0 | 1 | 162 | 371285 | 371446 | Undibacterium sp. KW1 DNA, complete genome | blastn | 12803 | 228 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium sp. KW1 | ||
| 2265175 | 2265175 | PRJEB43370_P_NODE_2162_length_295_cov_1.430894_g2119_i0 | PRJEB43370 | 2162 | 295 | 1.430894 | 4.2211373 | Bradyrhizobium | 374 | Bacteria | Bacteria | 252 | 2.52e-62 | NTclustered | gi|146189981|emb|CU234118.1| | 114615 | g2119 | i0 | 82.594 | 95.6440677966102 | 293 | 43 | 98 | 8 | 4 | 292 | 177449 | 177737 | Bradyrhizobium sp. ORS278,complete sequence | blastn | 28215 | 254 | 0.992125984251969 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. ORS 278 | ||
| 2265185 | 2265185 | PRJEB43370_P_NODE_9282_length_165_cov_0.896552_g9239_i0 | PRJEB43370 | 9282 | 165 | 0.896552 | 1.4793108 | root | 1 | Root_unresolved | Root_unresolved | 58.4 | 2.97e-4 | NTclustered | gi|1151160134|gb|CP018970.1| | 562 | g9239 | i0 | 100 | 11.9636363636364 | 31 | 0 | 19 | 0 | 68 | 98 | 380315 | 380285 | Escherichia coli strain Ecol_542, complete genome | blastn | 1974 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3886278 | 3886278 | PRJEB43370_P_NODE_10504_length_163_cov_0.912281_g10461_i0 | PRJEB43370 | 10504 | 163 | 0.912281 | 1.48701803 | Ottowia sp. SB7-C50 | 3081231 | Bacteria | Bacteria | 183 | 4.62e-42 | NTclustered | gi|2606722230|gb|CP136995.1| | 3081231 | g10461 | i0 | 88.387 | 68.760736196319 | 155 | 15 | 93 | 2 | 9 | 160 | 215033 | 215187 | Ottowia sp. SB7-C50 chromosome, complete genome | blastn | 11208 | 183 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Ottowia | Ottowia sp. SB7-C50 | ||
| 3886336 | 3886336 | PRJEB43370_P_NODE_6124_length_185_cov_1.485294_g6081_i0 | PRJEB43370 | 6124 | 185 | 1.485294 | 2.7477939 | Acidovorax delafieldii | 47920 | Bacteria | Bacteria | 111 | 2.57e-20 | NTclustered | gi|2842886548|gb|CP171997.1| | 47920 | g6081 | i0 | 84.483 | 3.81081081081081 | 116 | 14 | 62 | 4 | 16 | 129 | 3996394 | 3996507 | Acidovorax delafieldii strain UC81_30 chromosome, complete genome | blastn | 705 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax delafieldii | ||
| 3886344 | 3886344 | PRJEB43370_P_NODE_6824_length_175_cov_3.611111_g6781_i0 | PRJEB43370 | 6824 | 175 | 3.611111 | 6.31944425 | Hylemonella gracilis | 80880 | Bacteria | Bacteria | 316 | 4.74e-82 | NTclustered | gi|1586158954|gb|CP031395.1| | 80880 | g6781 | i0 | 99.425 | 265.497142857143 | 174 | 1 | 99 | 0 | 1 | 174 | 391769 | 391942 | Hylemonella gracilis strain NS1 chromosome | blastn | 46462 | 316 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hylemonella | Hylemonella gracilis | ||
| 3886362 | 3886362 | PRJEB43370_P_NODE_9504_length_165_cov_0.896552_g9461_i0 | PRJEB43370 | 9504 | 165 | 0.896552 | 1.4793108 | Plesiomonas shigelloides | 703 | Bacteria | Bacteria | 300 | 4.46e-77 | NTclustered | gi|2050160876|gb|CP076372.1| | 703 | g9461 | i0 | 99.394 | 8 | 165 | 1 | 100 | 0 | 1 | 165 | 1176963 | 1177127 | Plesiomonas shigelloides strain Colony13 chromosome | blastn | 1320 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Plesiomonas | Plesiomonas shigelloides | ||
| 3886367 | 3886367 | PRJEB43370_P_NODE_9984_length_164_cov_0.904348_g9941_i0 | PRJEB43370 | 9984 | 164 | 0.904348 | 1.48313072 | Hydrogenophaga crassostreae | 1763535 | Bacteria | Bacteria | 287 | 3.45e-73 | NTclustered | gi|1078664375|gb|CP017476.1| | 1763535 | g9941 | i0 | 98.171 | 1 | 164 | 3 | 100 | 0 | 1 | 164 | 3362978 | 3362815 | Hydrogenophaga crassostreae strain LPB0072 chromosome, complete genome | blastn | 164 | 287 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | Hydrogenophaga crassostreae | ||
| 5162512 | 5162512 | PRJEB43370_P_NODE_3205_length_243_cov_3.149485_g3162_i0 | PRJEB43370 | 3205 | 243 | 3.149485 | 7.65324855 | Piscinibacter gummiphilus | 946333 | Bacteria | Bacteria | 422 | 1.45e-113 | NTclustered | gi|1275594026|gb|CP024645.1| | 946333 | g3162 | i0 | 97.942 | 343.559670781893 | 243 | 5 | 100 | 0 | 1 | 243 | 5691294 | 5691536 | Piscinibacter gummiphilus strain NBRC 109400 chromosome, complete genome | blastn | 83485 | 422 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Piscinibacter | Piscinibacter gummiphilus | ||
| 6093065 | 6093065 | PRJEB43370_P_NODE_6605_length_178_cov_2.418605_g6562_i0 | PRJEB43370 | 6605 | 178 | 2.418605 | 4.3051169 | Pseudomonadota | 1224 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2070639042|gb|CP079203.1| | 33051 | g6562 | i0 | 94.444 | 0.561797752808989 | 36 | 1 | 20 | 1 | 60 | 94 | 3246328 | 3246363 | Sphingomonas sanguinis strain NP2-R2 chromosome, complete genome | blastn | 100 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sanguinis | ||
| 6438379 | 6438379 | PRJEB43370_P_NODE_6966_length_174_cov_1.224000_g6923_i0 | PRJEB43370 | 6966 | 174 | 1.224 | 2.12976 | Solimonas sp. K1W22B-7 | 2303331 | Bacteria | Bacteria | 272 | 1.03e-68 | NTclustered | gi|1464353590|gb|CP031704.1| | 2303331 | g6923 | i0 | 94.857 | 188.747126436782 | 175 | 8 | 100 | 1 | 1 | 174 | 309979 | 309805 | Solimonas sp. K1W22B-7 chromosome, complete genome | blastn | 32842 | 272 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Solimonas | Solimonas sp. K1W22B-7 | ||
| 6438397 | 6438397 | PRJEB43370_P_NODE_9566_length_165_cov_0.896552_g9523_i0 | PRJEB43370 | 9566 | 165 | 0.896552 | 1.4793108 | Pseudomonas knackmussii | 65741 | Bacteria | Bacteria | 108 | 2.9e-19 | NTclustered | gi|631776901|emb|HG322950.1| | 1301098 | g9523 | i0 | 93.243 | 39.0848484848485 | 74 | 3 | 44 | 2 | 89 | 161 | 2377329 | 2377401 | Pseudomonas knackmussii B13 complete genome | blastn | 6449 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas knackmussii | ||
| 7712551 | 7712551 | PRJEB43370_P_NODE_10927_length_162_cov_0.920354_g10884_i0 | PRJEB43370 | 10927 | 162 | 0.920354 | 1.49097348 | Candidatus Thioglobus sp. NP1 | 2508687 | Bacteria | Bacteria | 104 | 3.67e-18 | NTclustered | gi|1430660017|gb|CP023860.1| | 2508687 | g10884 | i0 | 79.195 | 0.919753086419753 | 149 | 31 | 92 | 0 | 3 | 151 | 447808 | 447956 | Candidatus Thioglobus sp. NP1 chromosome, complete genome | blastn | 149 | 104 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Candidatus Pseudothioglobaceae | Candidatus Thioglobus | Candidatus Thioglobus sp. NP1 | |||
| 7712626 | 7712626 | PRJEB43370_P_NODE_7607_length_169_cov_0.866667_g7564_i0 | PRJEB43370 | 7607 | 169 | 0.866667 | 1.46466723 | Idiomarina abyssalis | 86102 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2087425684|gb|CP081832.1| | 86102 | g7564 | i0 | 100 | 0.165680473372781 | 28 | 0 | 17 | 0 | 50 | 77 | 773141 | 773114 | Idiomarina abyssalis strain MSP-CT chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Idiomarinaceae | Idiomarina | Idiomarina abyssalis | ||
| 8643085 | 8643085 | PRJEB43370_P_NODE_2647_length_266_cov_1.447005_g2604_i0 | PRJEB43370 | 2647 | 266 | 1.447005 | 3.8490333 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 492 | 1.2099999999999999e-134 | NTclustered | gi|2890447952|gb|CP177213.1| | 562 | g2604 | i0 | 100 | 932.43984962406 | 266 | 0 | 100 | 0 | 1 | 266 | 228490 | 228755 | Escherichia coli strain ECGI0223 chromosome, complete genome | blastn | 248029 | 492 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8643086 | 8643086 | PRJEB43370_P_NODE_4807_length_205_cov_1.974359_g4764_i0 | PRJEB43370 | 4807 | 205 | 1.974359 | 4.04743595 | Aeromonas | 642 | Bacteria | Bacteria | 374 | 3.3599999999999997e-99 | NTclustered | gi|1891095175|gb|CP043323.1| | 644 | g4764 | i0 | 99.515 | 864.439024390244 | 206 | 0 | 100 | 1 | 1 | 205 | 2205596 | 2205391 | Aeromonas hydrophila strain 3206 chromosome, complete genome | blastn | 177210 | 374 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas hydrophila | ||
| 8987370 | 8987370 | PRJEB43370_P_NODE_9268_length_165_cov_0.896552_g9225_i0 | PRJEB43370 | 9268 | 165 | 0.896552 | 1.4793108 | Halopseudomonas sabulinigri | 472181 | Bacteria | Bacteria | 95.3 | 2.26e-15 | NTclustered | gi|1085892452|emb|LT629763.1| | 472181 | g9225 | i0 | 81.356 | 23.2424242424242 | 118 | 20 | 71 | 2 | 4 | 120 | 1415059 | 1415175 | Pseudomonas sabulinigri strain JCM 14963 genome assembly, chromosome: I | blastn | 3835 | 95.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Halopseudomonas | Halopseudomonas sabulinigri | ||
| 9918119 | 9918119 | PRJEB43370_P_NODE_4188_length_217_cov_3.095238_g4145_i0 | PRJEB43370 | 4188 | 217 | 3.095238 | 6.71666646 | Acinetobacter | 469 | Bacteria | Bacteria | 401 | 1.6499999999999994e-107 | NTclustered | gi|1797096465|gb|CP041970.1| | 70348 | g4145 | i0 | 100 | 595.138248847926 | 217 | 0 | 100 | 0 | 1 | 217 | 2381414 | 2381630 | Acinetobacter dispersus strain NCCP 16014 chromosome, complete genome | blastn | 129145 | 401 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter dispersus | ||
| 11538430 | 11538430 | PRJEB43370_P_NODE_6430_length_181_cov_1.386364_g6387_i0 | PRJEB43370 | 6430 | 181 | 1.386364 | 2.50931884 | Variovorax sp. V116 | 3065953 | Bacteria | Bacteria | 167 | 5.259999999999999e-37 | NTclustered | gi|2741144593|dbj|AP028661.1| | 3065953 | g6387 | i0 | 85.03 | 5.84530386740331 | 167 | 21 | 91 | 4 | 16 | 180 | 88362 | 88198 | Variovorax sp. V116 DNA, complete genome | blastn | 1058 | 167 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. V116 | ||
| 13743417 | 13743417 | PRJEB43370_P_NODE_4591_length_209_cov_2.581250_g4548_i0 | PRJEB43370 | 4591 | 209 | 2.58125 | 5.3948125 | Vibrionaceae | 641 | Bacteria | Bacteria | 91.6 | 3.88e-14 | NTclustered | gi|2778329021|dbj|AP031614.1| | 669 | g4548 | i0 | 79.231 | 25.2870813397129 | 130 | 27 | 62 | 0 | 22 | 151 | 3151391 | 3151262 | Vibrio harveyi TUMSAT-2019 DNA, chromosome 1, complete sequence | blastn | 5285 | 91.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio harveyi | ||
| 13743418 | 13743418 | PRJEB43370_P_NODE_6751_length_177_cov_1.195312_g6708_i0 | PRJEB43370 | 6751 | 177 | 1.195312 | 2.11570224 | Aeromonas | 642 | Bacteria | Bacteria | 95.3 | 2.45e-15 | NTclustered | gi|2489122791|gb|CP121835.1| | 654 | g6708 | i0 | 96.491 | 20.6271186440678 | 57 | 2 | 32 | 0 | 121 | 177 | 2641753 | 2641809 | Aeromonas veronii strain ANYA 18462 chromosome, complete genome | blastn | 3651 | 95.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas veronii | ||
| 15362401 | 15362401 | PRJEB43370_P_NODE_3693_length_229_cov_1.155556_g3650_i0 | PRJEB43370 | 3693 | 229 | 1.155556 | 2.64622324 | Chitinimonas koreensis | 356302 | Bacteria | Bacteria | 307 | 3.95e-79 | NTclustered | gi|1898132335|gb|CP060704.1| | 356302 | g3650 | i0 | 90.87 | 317.615720524017 | 230 | 19 | 100 | 2 | 1 | 229 | 5229031 | 5228803 | Chitinimonas koreensis strain R2A43-10 chromosome, complete genome | blastn | 72734 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chitinibacteraceae | Chitinimonas | Chitinimonas koreensis | ||
| 15362416 | 15362416 | PRJEB43370_P_NODE_5353_length_196_cov_1.258503_g5310_i0 | PRJEB43370 | 5353 | 196 | 1.258503 | 2.46666588 | Burkholderiales bacterium GJ-E10 | 1469502 | Bacteria | Bacteria | 305 | 1.18e-78 | NTclustered | gi|723001977|dbj|AP014683.1| | 1469502 | g5310 | i0 | 94.898 | 245.40306122449 | 196 | 8 | 100 | 2 | 1 | 196 | 369520 | 369713 | Burkholderiales bacterium GJ-E10 DNA, complete genome | blastn | 48099 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales bacterium GJ-E10 | ||||
| 15362417 | 15362417 | PRJEB43370_P_NODE_5653_length_191_cov_1.830986_g5610_i0 | PRJEB43370 | 5653 | 191 | 1.830986 | 3.49718326 | Vibrio misgurnus | 2993714 | Bacteria | Bacteria | 353 | 4.02e-93 | NTclustered | gi|2482491403|gb|CP113241.1| | 2993714 | g5610 | i0 | 100 | 914.685863874346 | 191 | 0 | 100 | 0 | 1 | 191 | 45105 | 45295 | Vibrio sp. gvc chromosome 1, complete sequence | blastn | 174705 | 353 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio misgurnus | ||
| 16292661 | 16292661 | PRJEB43370_P_NODE_10413_length_163_cov_0.912281_g10370_i0 | PRJEB43370 | 10413 | 163 | 0.912281 | 1.48701803 | Escherichia | 561 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g10370 | i0 | 100 | 100 | 163 | 0 | 100 | 0 | 1 | 163 | 312621 | 312783 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 16300 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16292668 | 16292668 | PRJEB43370_P_NODE_6113_length_185_cov_1.529412_g6070_i0 | PRJEB43370 | 6113 | 185 | 1.529412 | 2.8294122 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 342 | 8.369999999999999e-90 | NTclustered | gi|2208429280|dbj|AP025653.1| | 545 | g6070 | i0 | 100 | 679.2 | 185 | 0 | 100 | 0 | 1 | 185 | 3663235 | 3663419 | Citrobacter koseri TUM20903 DNA, complete genome | blastn | 125652 | 342 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Citrobacter | Citrobacter koseri | ||
| 16292670 | 16292670 | PRJEB43370_P_NODE_7073_length_172_cov_2.000000_g7030_i0 | PRJEB43370 | 7073 | 172 | 2 | 3.44 | Comamonadaceae | 80864 | Bacteria | Bacteria | 318 | 1.2899999999999999e-82 | NTclustered | gi|1799006380|gb|CP047650.1| | 2697032 | g7030 | i0 | 100 | 358.017441860465 | 172 | 0 | 100 | 0 | 1 | 172 | 681090 | 681261 | Xylophilus rhododendri strain KACC 21265 chromosome, complete genome | blastn | 61579 | 318 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Xylophilus | Xylophilus rhododendri | |||
| 17911751 | 17911751 | PRJEB43370_P_NODE_2575_length_270_cov_0.936652_g2532_i0 | PRJEB43370 | 2575 | 270 | 0.936652 | 2.5289604 | Ahrensia marina | 1514904 | Bacteria | Bacteria | 239 | 1.7700000000000002e-58 | NTclustered | gi|2808402090|gb|CP159483.1| | 1514904 | g2532 | i0 | 83.65 | 186.859259259259 | 263 | 34 | 96 | 9 | 12 | 270 | 1227020 | 1226763 | Ahrensia marina strain ac1 chromosome, complete genome | blastn | 50452 | 239 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Ahrensiaceae | Ahrensia | Ahrensia marina | ||
| 17911805 | 17911805 | PRJEB43370_P_NODE_8495_length_167_cov_0.881356_g8452_i0 | PRJEB43370 | 8495 | 167 | 0.881356 | 1.47186452 | Roseateles sp. DAIF2 | 2714952 | Bacteria | Bacteria | 224 | 2.81e-54 | NTclustered | gi|1934957904|gb|CP049919.1| | 2714952 | g8452 | i0 | 92.994 | 23.9820359281437 | 157 | 6 | 93 | 5 | 12 | 167 | 820975 | 821127 | Roseateles sp. DAIF2 chromosome, complete genome | blastn | 4005 | 224 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. DAIF2 | ||
| 19185748 | 19185748 | PRJEB43370_P_NODE_9016_length_166_cov_0.888889_g8973_i0 | PRJEB43370 | 9016 | 166 | 0.888889 | 1.47555574 | Metapseudomonas otitidis | 319939 | Bacteria | Bacteria | 132 | 1.74e-26 | NTclustered | gi|2573316986|gb|CP133395.1| | 319939 | g8973 | i0 | 81.437 | 6.03614457831325 | 167 | 26 | 100 | 4 | 1 | 166 | 3015810 | 3015972 | Metapseudomonas otitidis strain 149 chromosome | blastn | 1002 | 132 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Metapseudomonas | Metapseudomonas otitidis | ||
| 20116473 | 20116473 | PRJEB43370_P_NODE_10876_length_162_cov_0.920354_g10833_i0 | PRJEB43370 | 10876 | 162 | 0.920354 | 1.49097348 | Burkholderiales | 80840 | Bacteria | Bacteria | 115 | 1.7e-21 | NTclustered | gi|2916315737|gb|CP181387.1| | 28068 | g10833 | i0 | 82.09 | 76.4074074074074 | 134 | 24 | 83 | 0 | 1 | 134 | 1563619 | 1563752 | Mutant Rubrivivax gelatinosus isolate AJ1, complete genome | blastn | 12378 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Rubrivivax | Rubrivivax gelatinosus | ||
| 20116486 | 20116486 | PRJEB43370_P_NODE_8696_length_166_cov_1.777778_g8653_i0 | PRJEB43370 | 8696 | 166 | 1.777778 | 2.95111148 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 307 | 2.69e-79 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g8653 | i0 | 100 | 664.174698795181 | 166 | 0 | 100 | 0 | 1 | 166 | 186540 | 186375 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 110253 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20461003 | 20461003 | PRJEB43370_P_NODE_10237_length_163_cov_0.912281_g10194_i0 | PRJEB43370 | 10237 | 163 | 0.912281 | 1.48701803 | Caulobacter sp. UC70_42 | 3374551 | Bacteria | Bacteria | 255 | 9.65e-64 | NTclustered | gi|2842900254|gb|CP171994.1| | 3374551 | g10194 | i0 | 95.062 | 14.9325153374233 | 162 | 8 | 99 | 0 | 1 | 162 | 2393361 | 2393522 | Caulobacter sp. UC70_42 chromosome, complete genome | blastn | 2434 | 255 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | Caulobacter | Caulobacter sp. UC70_42 | ||
| 20461049 | 20461049 | PRJEB43370_P_NODE_5277_length_197_cov_1.405405_g5234_i0 | PRJEB43370 | 5277 | 197 | 1.405405 | 2.76864785 | Pseudomonas sp. ABC1 | 2748080 | Bacteria | Bacteria | 257 | 3.3700000000000004e-64 | NTclustered | gi|1867220348|gb|CP058349.1| | 2748080 | g5234 | i0 | 94.643 | 261.802030456853 | 168 | 6 | 84 | 3 | 33 | 197 | 1035020 | 1034853 | Pseudomonas sp. ABC1 chromosome, complete genome | blastn | 51575 | 257 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. ABC1 | ||
| 21392019 | 21392019 | PRJEB43370_P_NODE_3237_length_242_cov_1.813472_g3194_i0 | PRJEB43370 | 3237 | 242 | 1.813472 | 4.38860224 | Comamonas | 283 | Bacteria | Bacteria | 425 | 1.11e-114 | NTclustered | gi|507148303|ref|NR_103106.1| | 285 | g3194 | i0 | 98.347 | 442.421487603306 | 242 | 4 | 100 | 0 | 1 | 242 | 1388 | 1629 | Comamonas testosteroni strain CNB-1 23S ribosomal RNA gene, complete sequence | blastn | 107066 | 425 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 21736884 | 21736884 | PRJEB43370_P_NODE_2758_length_261_cov_0.981132_g2715_i0 | PRJEB43370 | 2758 | 261 | 0.981132 | 2.56075452 | Aquipseudomonas alcaligenes | 43263 | Bacteria | Bacteria | 470 | 5.539999999999998e-128 | NTclustered | gi|1009291925|gb|CP014784.1| | 43263 | g2715 | i0 | 99.231 | 97.7854406130268 | 260 | 2 | 99 | 0 | 1 | 260 | 2989897 | 2989638 | Aquipseudomonas alcaligenes strain NEB 585, complete genome | blastn | 25522 | 470 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Aquipseudomonas | Aquipseudomonas alcaligenes | ||
| 22666817 | 22666817 | PRJEB43370_P_NODE_10638_length_162_cov_0.920354_g10595_i0 | PRJEB43370 | 10638 | 162 | 0.920354 | 1.49097348 | Alicycliphilus | 201096 | Bacteria | Bacteria | 159 | 7.72e-35 | NTclustered | gi|1832644504|gb|CP051298.1| | 179636 | g10595 | i0 | 85.093 | 6.51851851851852 | 161 | 18 | 98 | 6 | 1 | 158 | 2047613 | 2047770 | Alicycliphilus denitrificans strain DP3 chromosome, complete genome | blastn | 1056 | 159 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Alicycliphilus | Alicycliphilus denitrificans | ||
| 23012134 | 23012134 | PRJEB43370_P_NODE_11079_length_159_cov_2.054545_g11036_i0 | PRJEB43370 | 11079 | 159 | 2.054545 | 3.26672655 | Melaminivora suipulveris | 2109913 | Bacteria | Bacteria | 95.3 | 2.16e-15 | NTclustered | gi|1364841887|gb|CP027667.1| | 2109913 | g11036 | i0 | 78.065 | 10.9496855345912 | 155 | 30 | 96 | 3 | 1 | 153 | 622277 | 622125 | Melaminivora suipulveris strain SC2-9 chromosome, complete genome | blastn | 1741 | 95.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Melaminivora | Melaminivora suipulveris | ||
| 23942250 | 23942250 | PRJEB43370_P_NODE_399_length_669_cov_7.611290_g359_i0 | PRJEB43370 | 399 | 669 | 7.61129 | 50.9195301 | Aeromonas | 642 | Bacteria | Bacteria | 1042 | 0 | NTclustered | gi|2489112687|gb|CP121833.1| | 654 | g359 | i0 | 94.784 | 834.116591928251 | 671 | 32 | 100 | 3 | 1 | 669 | 3834774 | 3834105 | Aeromonas veronii strain ANYA 18644 chromosome, complete genome | blastn | 558024 | 1042 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas veronii | ||
| 23942257 | 23942257 | PRJEB43370_P_NODE_7619_length_169_cov_0.866667_g7576_i0 | PRJEB43370 | 7619 | 169 | 0.866667 | 1.46466723 | Sutterella | 40544 | Bacteria | Bacteria | 278 | 2.14e-70 | NTclustered | gi|1997760568|emb|LR994475.1| | 286133 | g7576 | i0 | 96.429 | 244.414201183432 | 168 | 6 | 99 | 0 | 2 | 169 | 734663 | 734830 | uncultured Sutterella sp. isolate Sutterella canine HQ MAG genome assembly, chromosome: 1 | blastn | 41306 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sutterellaceae | Sutterella | uncultured Sutterella sp. | ||
| 24286055 | 24286055 | PRJEB43370_P_NODE_9560_length_165_cov_0.896552_g9517_i0 | PRJEB43370 | 9560 | 165 | 0.896552 | 1.4793108 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2735198065|gb|CP156025.1| | 863372 | g9517 | i0 | 100 | 69.4424242424242 | 165 | 0 | 100 | 0 | 1 | 165 | 3018721 | 3018885 | Herbaspirillum huttiense strain CLJ01 chromosome, complete genome | blastn | 11458 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 25216041 | 25216041 | PRJEB43370_P_NODE_1140_length_408_cov_5.058496_g1097_i0 | PRJEB43370 | 1140 | 408 | 5.058496 | 20.63866368 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 60.2 | 2.34e-4 | NTclustered | gi|1551772302|gb|CP025069.1| | 518 | g1097 | i0 | 92.683 | 1.73039215686275 | 41 | 3 | 10 | 0 | 146 | 186 | 4416915 | 4416875 | Bordetella bronchiseptica strain I124 chromosome, complete genome | blastn | 706 | 60.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Bordetella | Bordetella bronchiseptica | ||
| 25216042 | 25216042 | PRJEB43370_P_NODE_3060_length_248_cov_2.814070_g3017_i0 | PRJEB43370 | 3060 | 248 | 2.81407 | 6.9788936 | Aeromonas | 642 | Bacteria | Bacteria | 453 | 5.2600000000000005e-123 | NTclustered | gi|2212808653|gb|CP045501.1| | 644 | g3017 | i0 | 99.597 | 910.923387096774 | 248 | 1 | 100 | 0 | 1 | 248 | 88783 | 89030 | Aeromonas hydrophila strain Aer_Pi25.1HTAS chromosome, complete genome | blastn | 225909 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas hydrophila | ||
| 25216048 | 25216048 | PRJEB43370_P_NODE_5040_length_201_cov_1.664474_g4997_i0 | PRJEB43370 | 5040 | 201 | 1.664474 | 3.34559274 | Acinetobacter | 469 | Bacteria | Bacteria | 372 | 1.18e-98 | NTclustered | gi|1537789200|gb|CP032135.1| | 29430 | g4997 | i0 | 100 | 616.009950248756 | 201 | 0 | 100 | 0 | 1 | 201 | 354218 | 354018 | Acinetobacter haemolyticus strain sz1652 chromosome, complete genome | blastn | 123818 | 372 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter haemolyticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;