RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB43370" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB43370 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5162478 5162478 PRJEB43370_P_NODE_10505_length_163_cov_0.912281_g10462_i0 PRJEB43370 10505 163 0.912281 1.48701803 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 296 5.68e-76   NTclustered gi|290971318|ref|XM_002668414.1| 5762 g10462 i0 99.387 42.9325153374233 163 1 100 0 1 163 581 419 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_61055), partial mRNA blastn 6998 296 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6438399 6438399 PRJEB43370_P_NODE_9666_length_164_cov_1.539130_g9623_i0 PRJEB43370 9666 164 1.53913 2.5241732 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 226 7.619999999999998e-55   NTclustered gi|290986441|ref|XM_002675887.1| 5762 g9623 i0 91.463 1 164 14 100 0 1 164 771 934 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_58349), partial mRNA blastn 164 226 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11538414 11538414 PRJEB43370_P_NODE_4950_length_203_cov_1.350649_g4907_i0 PRJEB43370 4950 203 1.350649 2.74181747 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 305 1.23e-78   NTclustered gi|290990585|ref|XM_002677871.1| 5762 g4907 i0 95.312 3.6551724137931 192 9 95 0 1 192 297 106 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_33131), partial mRNA blastn 742 305 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20461018 20461018 PRJEB43370_P_NODE_1957_length_311_cov_2.343511_g1914_i0 PRJEB43370 1957 311 2.343511 7.28831921 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 165 3.58e-36   NTclustered gi|290976481|ref|XM_002670923.1| 5762 g1914 i0 78.113 44.8553054662379 265 55 85 3 45 307 691 954 Naegleria gruberi aconitase (NAEGRDRAFT_59586), mRNA blastn 13950 165 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20461082 20461082 PRJEB43370_P_NODE_9697_length_164_cov_1.356522_g9654_i0 PRJEB43370 9697 164 1.356522 2.22469608 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 183 4.65e-42   NTclustered gi|2119417997|ref|XM_044688418.1| 51637 g9654 i0 89.116 0.896341463414634 147 16 90 0 1 147 147 1 Naegleria lovaniensis uncharacterized protein (C9374_012630), partial mRNA blastn 147 183 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;