RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJEB43370" and tax_kingdom = "Sangervirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Sangervirae · 1 ✖

bioproject 1

  • PRJEB43370 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6438306 6438306 PRJEB43370_P_NODE_10486_length_163_cov_0.912281_g10443_i0 PRJEB43370 10486 163 0.912281 1.48701803 Gokushovirus WZ-2015a 1758150 Viruses Viruses 52.8 0.014   NTclustered gi|961370346|gb|KT264763.1| 1758150 g10443 i0 100 0.171779141104294 28 0 17 0 27 54 5426 5399 Gokushovirus WZ-2015a isolate 15Fra10, complete genome blastn 28 52.8 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Gokushovirus WZ-2015a

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;