contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJEB41113" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59184 | 59184 | PRJEB41113_S_NODE_9161_length_163_cov_1.888889_g9152_i0 | PRJEB41113 | 9161 | 163 | 1.888889 | 3.07888907 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 244 | 2.09e-60 | NTclustered | gi|1276709865|gb|CP024700.1| | 2663009 | g9152 | i0 | 96.622 | 11.8098159509202 | 148 | 3 | 90 | 2 | 17 | 163 | 272815 | 272961 | Fusobacterium pseudoperiodonticum strain KCOM 1263 chromosome, complete genome | blastn | 1925 | 244 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 59186 | 59186 | PRJEB41113_S_NODE_9421_length_162_cov_1.824000_g9412_i0 | PRJEB41113 | 9421 | 162 | 1.824 | 2.95488 | Leptotrichia trevisanii | 109328 | Bacteria | Bacteria | 254 | 3.44e-63 | NTclustered | gi|1708572621|dbj|AP019831.1| | 109328 | g9412 | i0 | 98.601 | 6.18518518518519 | 143 | 2 | 88 | 0 | 1 | 143 | 47298 | 47156 | Leptotrichia trevisanii JMUB3870 DNA, complete genome | blastn | 1002 | 254 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia trevisanii | ||
| 1333393 | 1333393 | PRJEB41113_S_NODE_1002_length_262_cov_4.391111_g993_i0 | PRJEB41113 | 1002 | 262 | 4.391111 | 11.50471082 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 484 | 1.99e-132 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g993 | i0 | 100 | 100.057251908397 | 262 | 0 | 100 | 0 | 1 | 262 | 2007401 | 2007662 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 26215 | 484 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 2608981 | 2608981 | PRJEB41113_S_NODE_11923_length_155_cov_0.974576_g11914_i0 | PRJEB41113 | 11923 | 155 | 0.974576 | 1.5105928 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 276 | 6.95e-70 | NTclustered | gi|2706071841|gb|CP077111.1| | 76857 | g11914 | i0 | 98.71 | 5.86451612903226 | 155 | 2 | 100 | 0 | 1 | 155 | 1890701 | 1890547 | Fusobacterium polymorphum strain KCOM1275 chromosome, complete genome | blastn | 909 | 276 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 2608993 | 2608993 | PRJEB41113_S_NODE_1483_length_241_cov_5.318627_g1474_i0 | PRJEB41113 | 1483 | 241 | 5.318627 | 12.81789107 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 374 | 4.079999999999998e-99 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g1474 | i0 | 96.875 | 1.85892116182573 | 224 | 6 | 93 | 1 | 1 | 224 | 783317 | 783539 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 448 | 374 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 5161394 | 5161394 | PRJEB41113_S_NODE_14545_length_151_cov_3.166667_g14536_i0 | PRJEB41113 | 14545 | 151 | 3.166667 | 4.78166717 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 274 | 2.42e-69 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g14536 | i0 | 99.338 | 1 | 151 | 1 | 100 | 0 | 1 | 151 | 2014873 | 2014723 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 151 | 274 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 8986238 | 8986238 | PRJEB41113_S_NODE_2408_length_218_cov_1.441989_g2399_i0 | PRJEB41113 | 2408 | 218 | 1.441989 | 3.14353602 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 381 | 2.1599999999999994e-101 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g2399 | i0 | 99.522 | 13.4311926605505 | 209 | 1 | 96 | 0 | 1 | 209 | 1407850 | 1407642 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 2928 | 381 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 11537337 | 11537337 | PRJEB41113_S_NODE_4190_length_193_cov_2.628205_g4181_i0 | PRJEB41113 | 4190 | 193 | 2.628205 | 5.07243565 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 217 | 5.5799999999999996e-52 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g4181 | i0 | 94.366 | 5.32124352331606 | 142 | 7 | 92 | 1 | 38 | 178 | 156083 | 156224 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 1027 | 217 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 12812670 | 12812670 | PRJEB41113_S_NODE_8451_length_166_cov_2.643411_g8442_i0 | PRJEB41113 | 8451 | 166 | 2.643411 | 4.38806226 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 237 | 3.58e-58 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g8442 | i0 | 96.503 | 307.518072289157 | 143 | 5 | 86 | 0 | 22 | 164 | 53934 | 53792 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 51048 | 237 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 13743327 | 13743327 | PRJEB41113_S_NODE_14651_length_151_cov_1.938596_g14642_i0 | PRJEB41113 | 14651 | 151 | 1.938596 | 2.92727996 | Fusobacterium | 848 | Bacteria | Bacteria | 279 | 5.19e-71 | NTclustered | gi|2704977725|gb|CP077125.1| | 851 | g14642 | i0 | 100 | 100 | 151 | 0 | 100 | 0 | 1 | 151 | 1110234 | 1110384 | Fusobacterium nucleatum strain KCOM3714 chromosome, complete genome | blastn | 15100 | 279 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 15017701 | 15017701 | PRJEB41113_S_NODE_5532_length_184_cov_1.544218_g5523_i0 | PRJEB41113 | 5532 | 184 | 1.544218 | 2.84136112 | Fusobacterium | 848 | Bacteria | Bacteria | 292 | 8.490000000000001e-75 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g5523 | i0 | 99.379 | 87.5 | 161 | 1 | 88 | 0 | 24 | 184 | 416329 | 416169 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 16100 | 292 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 17567642 | 17567642 | PRJEB41113_S_NODE_10734_length_158_cov_1.471074_g10725_i0 | PRJEB41113 | 10734 | 158 | 1.471074 | 2.32429692 | Leptotrichia | 32067 | Bacteria | Bacteria | 255 | 9.27e-64 | NTclustered | gi|1227268105|gb|CP016753.1| | 712368 | g10725 | i0 | 99.291 | 4.6772151898734204 | 141 | 1 | 89 | 0 | 1 | 141 | 696774 | 696634 | Leptotrichia sp. oral taxon 498, complete genome | blastn | 739 | 255 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 498 | ||
| 18841555 | 18841555 | PRJEB41113_S_NODE_9175_length_163_cov_1.801587_g9166_i0 | PRJEB41113 | 9175 | 163 | 1.801587 | 2.93658681 | Fusobacterium | 848 | Bacteria | Bacteria | 300 | 4.39e-77 | NTclustered | gi|958162200|gb|CP013331.1| | 1307442 | g9166 | i0 | 100 | 8.94478527607362 | 162 | 0 | 99 | 0 | 1 | 162 | 353332 | 353493 | Fusobacterium hwasookii ChDC F174, complete genome | blastn | 1458 | 300 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium hwasookii | ||
| 20116403 | 20116403 | PRJEB41113_S_NODE_13716_length_152_cov_3.800000_g13707_i0 | PRJEB41113 | 13716 | 152 | 3.8 | 5.776 | Fusobacterium | 848 | Bacteria | Bacteria | 76.8 | 7.37e-10 | NTclustered | gi|1948622963|gb|CP066022.1| | 285729 | g13707 | i0 | 82.558 | 5.13157894736842 | 86 | 15 | 57 | 0 | 1 | 86 | 109117 | 109032 | Fusobacterium canifelinum strain FDAARGOS_999 chromosome, complete genome | blastn | 780 | 76.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium canifelinum | ||
| 23011131 | 23011131 | PRJEB41113_S_NODE_7579_length_171_cov_1.701493_g7570_i0 | PRJEB41113 | 7579 | 171 | 1.701493 | 2.90955303 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 316 | 4.6e-82 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g7570 | i0 | 100 | 99.4736842105263 | 171 | 0 | 100 | 0 | 1 | 171 | 1513063 | 1513233 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 17010 | 316 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 23942196 | 23942196 | PRJEB41113_S_NODE_8359_length_166_cov_12.317829_g8350_i0 | PRJEB41113 | 8359 | 166 | 12.317829 | 20.44759614 | Fusobacterium | 848 | Bacteria | Bacteria | 302 | 1.2500000000000001e-77 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g8350 | i0 | 99.398 | 452.765060240964 | 166 | 1 | 100 | 0 | 1 | 166 | 91814 | 91649 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 75159 | 302 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;