RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB39643" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB39643 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23009475 23009475 PRJEB39643_P_NODE_133939_length_247_cov_1.678161_g133746_i0 PRJEB39643 133939 247 1.678161 4.14505767 Vexillifera abyssalis 2301597 Discosea other_Eukaryota 134 7.750000000000001e-27   NTclustered gi|1450114843|gb|MH349020.1| 2301597 g133746 i0 97.436 48.2631578947368 78 2 51 0 1 78 1890 1813 Vexillifera abyssalis clone 4411 small subunit ribosomal RNA gene, partial sequence blastn 11921 134 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera abyssalis
24283438 24283438 PRJEB39643_P_NODE_152580_length_235_cov_10.024691_g152387_i0 PRJEB39643 152580 235 10.024691 23.55802385 Vannella sp. ACN1 1215628 Discosea other_Eukaryota 412 8.39e-111   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g152387 i0 98.298 92.2127659574468 235 4 100 0 1 235 374 140 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 21670 412 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;