contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJEB39269" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57111 | 57111 | PRJEB39269_P_NODE_66981_length_170_cov_2.854962_g66576_i0 | PRJEB39269 | 66981 | 170 | 2.854962 | 4.8534354 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 82.4 | 1.81e-11 | NTclustered | gi|2621701418|emb|OY760136.1| | 2910147 | g66576 | i0 | 88.235 | 0.4 | 68 | 8 | 40 | 0 | 91 | 158 | 2242234 | 2242301 | MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 | blastn | 68 | 82.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 4817158 | 4817158 | PRJEB39269_P_NODE_76984_length_161_cov_1.303279_g76579_i0 | PRJEB39269 | 76984 | 161 | 1.303279 | 2.09827919 | Granulicella | 940557 | Bacteria | Bacteria | 291 | 2.6e-74 | NTclustered | gi|470487846|ref|NR_076839.1| | 940615 | g76579 | i0 | 99.375 | 87.8571428571429 | 160 | 1 | 99 | 0 | 1 | 160 | 899 | 1058 | Granulicella tundricola strain MP5ACTX9 23S ribosomal RNA gene, complete sequence | blastn | 14145 | 291 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | Granulicella tundricola | ||
| 6435304 | 6435304 | PRJEB39269_P_NODE_80446_length_158_cov_3.201681_g80041_i0 | PRJEB39269 | 80446 | 158 | 3.2016810000000002 | 5.05865598 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 75 | 2.79e-9 | NTclustered | gi|2874254049|emb|OY970373.1| | 171953 | g80041 | i0 | 87.692 | 0.854430379746835 | 65 | 6 | 41 | 2 | 10 | 73 | 5882962 | 5883025 | MAG: uncultured Acidobacteriota bacterium isolate MFD09368.bin.c.1 genome assembly, chromosome: 1 | blastn | 135 | 75 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 8984144 | 8984144 | PRJEB39269_P_NODE_61768_length_176_cov_1.197080_g61363_i0 | PRJEB39269 | 61768 | 176 | 1.19708 | 2.1068608 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 220 | 3.85e-53 | NTclustered | gi|2874253744|emb|OY969603.1| | 171953 | g61363 | i0 | 89.205 | 98.8977272727273 | 176 | 19 | 100 | 0 | 1 | 176 | 2019934 | 2020109 | MAG: uncultured Acidobacteriota bacterium isolate MFD01476.bin.c.1 genome assembly, chromosome: 1 | blastn | 17406 | 220 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 8984166 | 8984166 | PRJEB39269_P_NODE_72208_length_166_cov_0.874016_g71803_i0 | PRJEB39269 | 72208 | 166 | 0.874016 | 1.45086656 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 243 | 7.69e-60 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g71803 | i0 | 92.857 | 97.4096385542169 | 168 | 10 | 100 | 2 | 1 | 166 | 3558572 | 3558739 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 16170 | 243 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 10259817 | 10259817 | PRJEB39269_P_NODE_25969_length_274_cov_1.234043_g25564_i0 | PRJEB39269 | 25969 | 274 | 1.234043 | 3.38127782 | uncultured Granulicella sp. | 1241325 | Bacteria | Bacteria | 412 | 9.999999999999999e-111 | NTclustered | gi|2626255659|emb|OY843766.1| | 1241325 | g25564 | i0 | 95.057 | 139.226277372263 | 263 | 11 | 96 | 2 | 1 | 262 | 3196208 | 3195947 | MAG: uncultured Granulicella sp. isolate e6d70442-04f8-4699-a368-e2225de37168 genome assembly, chromosome: 1 | blastn | 38148 | 412 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | uncultured Granulicella sp. | ||
| 19182570 | 19182570 | PRJEB39269_P_NODE_68596_length_169_cov_3.453846_g68191_i0 | PRJEB39269 | 68596 | 169 | 3.453846 | 5.83699974 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 89.8 | 1.08e-13 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g68191 | i0 | 93.333 | 0.355029585798817 | 60 | 4 | 36 | 0 | 91 | 150 | 290798 | 290857 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 60 | 89.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 23009096 | 23009096 | PRJEB39269_P_NODE_28839_length_259_cov_1.118182_g28434_i0 | PRJEB39269 | 28839 | 259 | 1.118182 | 2.89609138 | Candidatus Korobacter versatilis | 658062 | Bacteria | Bacteria | 230 | 1.0199999999999998e-55 | NTclustered | gi|94549081|gb|CP000360.1| | 204669 | g28434 | i0 | 83.673 | 0.945945945945946 | 245 | 38 | 94 | 2 | 1 | 244 | 985991 | 986234 | Candidatus Koribacter versatilis Ellin345, complete genome | blastn | 245 | 230 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Candidatus Korobacteraceae | Candidatus Korobacter | Candidatus Korobacter versatilis | ||
| 23941586 | 23941586 | PRJEB39269_P_NODE_78359_length_160_cov_0.925620_g77954_i0 | PRJEB39269 | 78359 | 160 | 0.92562 | 1.480992 | Candidatus Solibacter | 332162 | Bacteria | Bacteria | 252 | 1.22e-62 | NTclustered | gi|470468228|ref|NR_076103.1| | 332163 | g77954 | i0 | 95.031 | 48.275 | 161 | 7 | 100 | 1 | 1 | 160 | 1751 | 1591 | Candidatus Solibacter usitatus strain Ellin6076 23S ribosomal RNA gene, complete sequence | blastn | 7724 | 252 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Solibacteraceae | Candidatus Solibacter | Candidatus Solibacter usitatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;