RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB36940" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB36940 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
56901 56901 PRJEB36940_P_NODE_7981_length_306_cov_2.042918_g7852_i0 PRJEB36940 7981 306 2.042918 6.25132908 Plakortis sp. CU203 2849318 Porifera other_Eukaryota 145 4.58e-30   NTclustered gi|2055839537|gb|MZ416381.1| 2849318 g7852 i0 85.517 47.6732026143791 145 13 47 5 163 306 699 836 Plakortis sp. CU203 small subunit ribosomal RNA gene, partial sequence blastn 14588 145 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Plakortis Plakortis sp. CU203
11534900 11534900 PRJEB36940_P_NODE_12630_length_251_cov_1.376404_g12501_i0 PRJEB36940 12630 251 1.376404 3.45477404 Corticium candelabrum 121492 Porifera other_Eukaryota 65.8 2.92e-6   NTclustered gi|2664285434|ref|XM_062646157.1| 121492 g12501 i0 93.182 15.2988047808765 44 3 18 0 11 54 7692 7649 PREDICTED: Corticium candelabrum cullin-7-like (LOC134179294), mRNA blastn 3840 65.8 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;