RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB36940" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB36940 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
56842 56842 PRJEB36940_P_NODE_4801_length_389_cov_1.968354_g4672_i0 PRJEB36940 4801 389 1.968354 7.65689706 Acytostelium subglobosum 361139 Evosea other_Eukaryota 167 1.27e-36   NTclustered gi|831788452|ref|XM_012903297.1| 1410327 g4672 i0 75.811 10.9974293059126 339 76 86 5 50 385 1907 1572 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 4278 167 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
19182219 19182219 PRJEB36940_P_NODE_15616_length_243_cov_0.905882_g15487_i0 PRJEB36940 15616 243 0.905882 2.20129326 Protosteliopsis fimicola 668364 Evosea other_Eukaryota 370 5.32e-98   NTclustered gi|260909284|gb|FJ766470.1| 668364 g15487 i0 94.628 100.139917695473 242 8 99 3 1 242 1275 1039 Protosteliopsis fimicola culture-collection CCAP:1569/I clone 3 18S ribosomal RNA gene, partial sequence blastn 24334 370 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protosteliopsis Protosteliopsis fimicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;