RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB36940" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB36940 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3882956 3882956 PRJEB36940_P_NODE_7224_length_321_cov_2.036290_g7095_i0 PRJEB36940 7224 321 2.03629 6.5364909 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 224 6.03e-54   NTclustered gi|2782885547|ref|XM_067064850.1| 252671 g7095 i0 82.375 49.7009345794393 261 42 81 3 58 316 245 503 PREDICTED: Clytia hemisphaerica ras-related protein ORAB-1 (LOC136808317), mRNA blastn 15954 224 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
16633591 16633591 PRJEB36940_P_NODE_15334_length_243_cov_2.276471_g15205_i0 PRJEB36940 15334 243 2.276471 5.53182453 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 132 2.7300000000000003e-26   NTclustered gi|605060084|gb|KF874224.1| 109801 g15205 i0 87.179 49.9835390946502 117 13 48 2 1 117 347 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12146 132 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;