RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB36940" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJEB36940 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3882834 3882834 PRJEB36940_P_NODE_13644_length_248_cov_1.337143_g13515_i0 PRJEB36940 13644 248 1.337143 3.31611464 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 75 4.79e-9   NTclustered gi|551540861|ref|XM_005758703.1| 280463 g13515 i0 87.5 0.258064516129032 64 8 26 0 135 198 909 846 Emiliania huxleyi CCMP1516 Calnexin mRNA blastn 64 75 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
10259611 10259611 PRJEB36940_P_NODE_7029_length_325_cov_4.718254_g6900_i0 PRJEB36940 7029 325 4.718254 15.3343255 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 148 3.7899999999999997e-31   NTclustered gi|551548842|ref|XM_005762007.1| 280463 g6900 i0 78.667 2.8 225 46 69 2 6 229 335 112 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 910 148 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;