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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJEB3181" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 8 ✖

tax_clade 1

bioproject 1

  • PRJEB3181 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5158290 5158290 PRJEB3181_P_NODE_22745_length_170_cov_14.539568_g22480_i0 PRJEB3181 22745 170 14.539568 24.7172656 Nanoarchaeum equitans 160232 Archaea Archaea 56.5 0.001   NTclustered gi|507148462|ref|NR_103265.1| 228908 g22480 i0 100 0.529411764705882 30 0 18 0 123 152 49 20 Nanoarchaeum equitans Kin4-M 5S ribosomal RNA, complete sequence blastn 90 56.5 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia Nanoarchaeales Nanoarchaeaceae Nanoarchaeum Nanoarchaeum equitans
6092006 6092006 PRJEB3181_S_NODE_7905_length_223_cov_62.079787_g7612_i0 PRJEB3181 7905 223 62.079787 138.43792501 root 1 Root_unresolved Root_unresolved 62.1 3.29e-5   NTclustered gi|1572541187|emb|LR135910.1| 1462426 g7612 i0 100 15.8789237668161 33 0 15 0 1 33 24566 24534 uncultured Aenigmarchaeota archaeon genomic DNA containing deoA-rbcL-e2b2 region region blastn 3541 62.1 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         uncultured Aenigmarchaeota archaeon
6434272 6434272 PRJEB3181_S_NODE_1606_length_399_cov_7.648352_g1316_i0 PRJEB3181 1606 399 7.648352 30.51692448 uncultured archaeon 115547 Archaea Archaea 355 2.6e-93   NTclustered gi|1032564008|gb|KX029804.1| 115547 g1316 i0 96.313 65.8872180451128 217 6 54 2 183 399 250 36 Uncultured archaeon clone A_OTU_328 16S ribosomal RNA gene, partial sequence blastn 26289 355 1 Archaea               uncultured archaeon
7366485 7366485 PRJEB3181_S_NODE_9326_length_207_cov_168.383721_g9033_i0 PRJEB3181 9326 207 168.383721 348.55430247 root 1 Root_unresolved Root_unresolved 63.9 8.37e-6   NTclustered gi|1572541187|emb|LR135910.1| 1462426 g9033 i0 100 17.1884057971014 34 0 16 0 174 207 24533 24566 uncultured Aenigmarchaeota archaeon genomic DNA containing deoA-rbcL-e2b2 region region blastn 3558 63.9 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         uncultured Aenigmarchaeota archaeon
20115327 20115327 PRJEB3181_S_NODE_10556_length_196_cov_135.521739_g10263_i0 PRJEB3181 10556 196 135.521739 265.62260844 root 1 Root_unresolved Root_unresolved 62.1 2.82e-5   NTclustered gi|1572541187|emb|LR135910.1| 1462426 g10263 i0 100 18.2040816326531 33 0 17 0 164 196 24534 24566 uncultured Aenigmarchaeota archaeon genomic DNA containing deoA-rbcL-e2b2 region region blastn 3568 62.1 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         uncultured Aenigmarchaeota archaeon
23007972 23007972 PRJEB3181_P_NODE_18199_length_194_cov_2.631902_g17935_i0 PRJEB3181 18199 194 2.631902 5.10588988 Salarchaeum sp. JOR-1 2599399 Archaea Archaea 52.8 0.017   NTclustered gi|1717336197|gb|CP042241.1| 2599399 g17935 i0 96.875 0.164948453608247 32 0 16 1 110 140 2048089 2048120 Salarchaeum sp. JOR-1 chromosome, complete genome blastn 32 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Salarchaeum Salarchaeum sp. JOR-1
23941257 23941257 PRJEB3181_S_NODE_7079_length_234_cov_131.859296_g6786_i0 PRJEB3181 7079 234 131.859296 308.55075264 root 1 Root_unresolved Root_unresolved 63.9 9.68e-6   NTclustered gi|1572541187|emb|LR135910.1| 1462426 g6786 i0 100 15.508547008547 34 0 15 0 201 234 24533 24566 uncultured Aenigmarchaeota archaeon genomic DNA containing deoA-rbcL-e2b2 region region blastn 3629 63.9 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         uncultured Aenigmarchaeota archaeon
24281871 24281871 PRJEB3181_S_NODE_16900_length_158_cov_1.626016_g16607_i0 PRJEB3181 16900 158 1.626016 2.56910528 Nitrosopumilus adriaticus 1580092 Archaea Archaea 62.1 2.17e-5   NTclustered gi|2790751567|gb|CP167059.1| 1580092 g16607 i0 97.222 0.227848101265823 36 1 23 0 55 90 882923 882958 Nitrosopumilus adriaticus strain CCS1 chromosome blastn 36 62.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus adriaticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;