RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB3181" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB3181 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7366407 7366407 PRJEB3181_P_NODE_21986_length_174_cov_1.489510_g21721_i0 PRJEB3181 21986 174 1.48951 2.5917474 Fungi 4751 Fungi Fungi 228 2.2699999999999997e-55   NTclustered gi|2028311018|ref|XM_040884425.1| 61395 g21721 i0 90.643 97.9425287356322 171 16 98 0 2 172 762 592 Linderina pennispora Actin/actin-like protein (DL89DRAFT_219936), partial mRNA blastn 17042 230 0.991304347826087 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
17907510 17907510 PRJEB3181_P_NODE_11155_length_254_cov_7.210762_g10891_i0 PRJEB3181 11155 254 7.210762 18.31533548 Piptocephalis corymbifera 78917 Fungi Fungi 71.3 6.37e-8   NTclustered gi|311235601|ref|NG_027616.1| 78917 g10891 i0 88.333 0.728346456692913 60 6 23 1 173 231 3234 3175 Piptocephalis corymbifera NRRL 2385 28S rRNA gene, partial sequence; from reference material blastn 185 71.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis corymbifera
23008015 23008015 PRJEB3181_P_NODE_3199_length_420_cov_9.424165_g2968_i0 PRJEB3181 3199 420 9.424165 39.581493 Kickxella alabastrina 61397 Fungi Fungi 54.7 0.011   NTclustered gi|2324015231|ref|XM_051538911.1| 61397 g2968 i0 100 0.0690476190476191 29 0 7 0 163 191 445 417 Kickxella alabastrina uncharacterized protein (BX661DRAFT_224628), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
24281858 24281858 PRJEB3181_S_NODE_15500_length_165_cov_1.246154_g15207_i0 PRJEB3181 15500 165 1.246154 2.0561541 Linderina pennispora 61395 Fungi Fungi 117 4.82e-22   NTclustered gi|2028311160|ref|XM_040889078.1| 61395 g15207 i0 86.792 10.9818181818182 106 12 64 2 1 105 328 432 Linderina pennispora ribosomal protein S19 (DL89DRAFT_273559), partial mRNA blastn 1812 117 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;