RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJEB3181" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB3181 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1330217 1330217 PRJEB3181_P_NODE_12242_length_242_cov_5.417062_g11978_i0 PRJEB3181 12242 242 5.417062 13.10929004 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 195 3.42e-45   NTclustered gi|402761747|gb|JX184005.1| 104788 g11978 i0 89.542 24.2685950413223 153 16 63 0 4 156 644 492 Macrotrachela quadricornifera isolate HR cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 5873 195 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
2606096 2606096 PRJEB3181_S_NODE_6983_length_236_cov_2.000000_g6690_i0 PRJEB3181 6983 236 2 4.72 Philodina roseola 96448 Rotifera other_Eukaryota 272 1.4899999999999996e-68   NTclustered gi|183178937|gb|EU432547.1| 96448 g6690 i0 87.448 11.3262711864407 239 27 100 1 1 236 30169 29931 Philodina roseola TAR protein gene, partial cds; U1-like Zn-finger-containing protein (U1Zn_1), unknown (PruORF0001_1), unknown (PrPCG0001_1), methione sulfide reductase B (MSRB_1), Strabismus, serine-threonin kinase copy 1, plasma membrane calcium-dependent ATPase (CAse_1), myosin essential light chain (MELC_1), and 82 kDa heat shock protein (hsp82_1) genes, complete cds; FBoxLRR_1 gene, complete sequence; and TPRA_1 (TPRA_1) gene, complete cds blastn 2673 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
3882129 3882129 PRJEB3181_P_NODE_9624_length_273_cov_16.491736_g9360_i0 PRJEB3181 9624 273 16.491736 45.02243928 Philodina citrina 468664 Rotifera other_Eukaryota 296 1.05e-75   NTclustered gi|407227484|emb|FR856884.1| 468664 g9360 i0 88.618 5.63736263736264 246 25 90 3 29 273 2399 2156 Philodina citrina complete mitochondrial genome blastn 1539 296 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
3882158 3882158 PRJEB3181_S_NODE_13644_length_175_cov_1.314286_g13351_i0 PRJEB3181 13644 175 1.314286 2.3000005 Adineta vaga 104782 Rotifera other_Eukaryota 207 2.97e-49   NTclustered gi|402761723|gb|JX183993.1| 104782 g13351 i0 88.372 0.982857142857143 172 20 98 0 1 172 446 617 Adineta vaga ATP synthase F0 subunit 6 (ATP6) gene, partial cds; mitochondrial blastn 172 207 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
3882231 3882231 PRJEB3181_S_NODE_4184_length_288_cov_1598.533597_g3891_i0 PRJEB3181 4184 288 1598.533597 4603.77675936 Rotaria rotatoria 231624 Rotifera other_Eukaryota 296 1.11e-75   NTclustered gi|270267490|ref|NC_013568.1| 231624 g3891 i0 92.381 16.7326388888889 210 13 73 3 78 286 2403 2196 Rotaria rotatoria mitochondrion, complete genome blastn 4819 296 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
4816771 4816771 PRJEB3181_S_NODE_8204_length_219_cov_35167.353261_g7911_i0 PRJEB3181 8204 219 35167.353261 77016.50364159 root 1 Root_unresolved Root_unresolved 289 1.36e-73   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g7911 i0 100 71.2328767123288 156 0 71 0 1 156 953 1108 Philodina acuticornis 18S rRNA gene blastn 15600 289 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
6434235 6434235 PRJEB3181_S_NODE_12326_length_183_cov_117.959459_g12033_i0 PRJEB3181 12326 183 117.959459 215.86580997 Adineta vaga 104782 Rotifera other_Eukaryota 237 4.01e-58   NTclustered gi|194500447|gb|EU850438.1| 104782 g12033 i0 94.231 20.2404371584699 156 7 85 2 29 183 28472 28626 Adineta vaga hypothetical protein 18 gene, partial cds; hypothetical protein 19, coatomer, GPCR, beta-transducin repeat, speckle-type POZ, adenosine kinase, prefoldin subunit, translation initiation factor eIF-4E, rho GTPase activating protein, histone H4, histone H3, histone H2B, and histone H2Av genes, complete cds; and mitochondrial ribosomal protein s22 gene, partial cds blastn 3704 237 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
7708486 7708486 PRJEB3181_S_NODE_6427_length_244_cov_5.545455_g6134_i0 PRJEB3181 6427 244 5.545455 13.5309102 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 261 3.36e-65   NTclustered gi|402761747|gb|JX184005.1| 104788 g6134 i0 88.426 42.327868852459 216 25 89 0 26 241 651 436 Macrotrachela quadricornifera isolate HR cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 10328 261 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
7708524 7708524 PRJEB3181_S_NODE_9427_length_206_cov_755.631579_g9134_i0 PRJEB3181 9427 206 755.631579 1556.6010527399999 Adineta vaga 104782 Rotifera other_Eukaryota 231 2.1599999999999997e-56   NTclustered gi|194500447|gb|EU850438.1| 104782 g9134 i0 94.631 26.6359223300971 149 8 72 0 1 149 26212 26064 Adineta vaga hypothetical protein 18 gene, partial cds; hypothetical protein 19, coatomer, GPCR, beta-transducin repeat, speckle-type POZ, adenosine kinase, prefoldin subunit, translation initiation factor eIF-4E, rho GTPase activating protein, histone H4, histone H3, histone H2B, and histone H2Av genes, complete cds; and mitochondrial ribosomal protein s22 gene, partial cds blastn 5487 231 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8642033 8642033 PRJEB3181_P_NODE_9107_length_281_cov_9.024000_g8843_i0 PRJEB3181 9107 281 9.024 25.35744 Adineta 104781 Rotifera other_Eukaryota 250 8.56e-62   NTclustered gi|72153731|gb|DQ089739.1| 104782 g8843 i0 100 49.4661921708185 135 0 96 0 147 281 1634 1500 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 13900 250 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8642059 8642059 PRJEB3181_S_NODE_2427_length_348_cov_19.376997_g2134_i0 PRJEB3181 2427 348 19.376997 67.43194956 Metazoa 33208 Rotifera other_Eukaryota 568 2.6499999999999995e-157   NTclustered gi|72153731|gb|DQ089739.1| 104782 g2134 i0 99.363 47.617816091954 314 1 90 1 1 314 1169 1481 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 16571 571 0.994746059544658 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
8983243 8983243 PRJEB3181_S_NODE_5928_length_252_cov_2.050691_g5635_i0 PRJEB3181 5928 252 2.050691 5.16774132 Adineta ricciae 249248 Rotifera other_Eukaryota 348 2.6e-91   NTclustered gi|62362195|gb|AY942837.1| 249248 g5635 i0 98 0.793650793650794 200 4 79 0 53 252 683 484 Adineta ricciae ribosomal protein S7-like protein mRNA, complete cds blastn 200 348 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
9917019 9917019 PRJEB3181_S_NODE_10728_length_195_cov_6.225000_g10435_i0 PRJEB3181 10728 195 6.225 12.13875 Eurotatoria 2816136 Rotifera other_Eukaryota 339 1.15e-88   NTclustered gi|259129963|gb|GQ398061.1| 104782 g10435 i0 97.949 99.9846153846154 195 4 100 0 1 195 6385 6191 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 19497 339 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
11192216 11192216 PRJEB3181_S_NODE_1889_length_377_cov_15.578947_g1597_i0 PRJEB3181 1889 377 15.578947 58.73263019 Adinetidae 104780 Rotifera other_Eukaryota 691 0   NTclustered gi|2537903787|gb|KM043252.2| 104782 g1597 i0 99.735 99.8010610079576 377 1 100 0 1 377 926 550 Adineta vaga voucher AD005 18S ribosomal RNA gene, partial sequence blastn 37625 691 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
11534098 11534098 PRJEB3181_P_NODE_11690_length_248_cov_10.562212_g11426_i0 PRJEB3181 11690 248 10.562212 26.19428576 Rotaria rotatoria 231624 Rotifera other_Eukaryota 141 4.65e-29   NTclustered gi|270267490|ref|NC_013568.1| 231624 g11426 i0 78.509 2.75806451612903 228 39 90 10 1 223 9362 9140 Rotaria rotatoria mitochondrion, complete genome blastn 684 141 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
14084405 14084405 PRJEB3181_S_NODE_3052_length_322_cov_111.644599_g2759_i0 PRJEB3181 3052 322 111.644599 359.49560878 Adineta vaga 104782 Rotifera other_Eukaryota 411 4.3299999999999996e-110   NTclustered gi|259129963|gb|GQ398061.1| 104782 g2759 i0 89.634 22.9409937888199 328 26 100 5 1 322 6369 6694 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 7387 411 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
14084418 14084418 PRJEB3181_S_NODE_3892_length_296_cov_1555.168582_g3599_i0 PRJEB3181 3892 296 1555.168582 4603.29900272 Philodina citrina 468664 Rotifera other_Eukaryota 300 8.89e-77   NTclustered gi|407227484|emb|FR856884.1| 468664 g3599 i0 90.708 14.6925675675676 226 19 76 2 72 296 2399 2175 Philodina citrina complete mitochondrial genome blastn 4349 300 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
15358315 15358315 PRJEB3181_S_NODE_8513_length_216_cov_1.988950_g8220_i0 PRJEB3181 8513 216 1.98895 4.296132 Adineta vaga 104782 Rotifera other_Eukaryota 255 1.35e-63   NTclustered gi|6018196|gb|AF143849.1|AF143849 104782 g8220 i0 91.444 11.4166666666667 187 15 87 1 28 214 714 529 Adineta vaga 82 kD heat shock protein 1 (hsp82-1) gene, partial cds blastn 2466 255 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16291582 16291582 PRJEB3181_S_NODE_7013_length_235_cov_45.485000_g6720_i0 PRJEB3181 7013 235 45.485 106.88975 Eurotatoria 2816136 Rotifera other_Eukaryota 337 5.189999999999998e-88   NTclustered gi|72153731|gb|DQ089739.1| 104782 g6720 i0 99.459 76.8170212765957 185 1 79 0 51 235 695 511 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 18052 337 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
17566657 17566657 PRJEB3181_P_NODE_3694_length_400_cov_16.317073_g3454_i0 PRJEB3181 3694 400 16.317073 65.268292 Adinetidae 104780 Rotifera other_Eukaryota 712 0   NTclustered gi|2537903787|gb|KM043252.2| 104782 g3454 i0 99.742 96.865 388 1 97 0 1 388 555 942 Adineta vaga voucher AD005 18S ribosomal RNA gene, partial sequence blastn 38746 712 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
17907671 17907671 PRJEB3181_S_NODE_12855_length_180_cov_4.055172_g12562_i0 PRJEB3181 12855 180 4.055172 7.2993096 Proales similis 360698 Rotifera other_Eukaryota 189 1.1199999999999996e-43   NTclustered gi|1859640894|gb|MN970216.1| 360698 g12562 i0 86.034 4.17222222222222 179 22 98 2 1 177 12357 12534 Proales similis mitochondrion, complete genome blastn 751 189 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
17907735 17907735 PRJEB3181_S_NODE_4015_length_293_cov_43.147287_g3722_i0 PRJEB3181 4015 293 43.147287 126.42155091 Rotaria rotatoria 231624 Rotifera other_Eukaryota 294 4.09e-75   NTclustered gi|270267490|ref|NC_013568.1| 231624 g3722 i0 90 15.1296928327645 230 20 78 3 12 240 2196 2423 Rotaria rotatoria mitochondrion, complete genome blastn 4433 294 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
19181363 19181363 PRJEB3181_P_NODE_11776_length_247_cov_13.324074_g11512_i0 PRJEB3181 11776 247 13.324074 32.91046278 Rotaria rotatoria 231624 Rotifera other_Eukaryota 156 1.65e-33   NTclustered gi|270267490|ref|NC_013568.1| 231624 g11512 i0 80.087 2.57894736842105 231 29 90 10 1 222 9362 9140 Rotaria rotatoria mitochondrion, complete genome blastn 637 156 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
20115362 20115362 PRJEB3181_S_NODE_2036_length_367_cov_177.533133_g1744_i0 PRJEB3181 2036 367 177.533133 651.54659811 Opisthokonta 33154 Rotifera other_Eukaryota 645 1.2599999999999995e-180   NTclustered gi|259129963|gb|GQ398061.1| 104782 g1744 i0 98.365 75.5286103542234 367 6 100 0 1 367 7004 6638 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 27719 651 0.990783410138249 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
20456825 20456825 PRJEB3181_S_NODE_10757_length_195_cov_2.237500_g10464_i0 PRJEB3181 10757 195 2.2375 4.363125 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 255 1.2e-63   NTclustered gi|402761761|gb|JX184012.1| 104788 g10464 i0 90.256 76.8205128205128 195 19 100 0 1 195 408 214 Macrotrachela quadricornifera isolate CR cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 14980 255 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
20456901 20456901 PRJEB3181_S_NODE_3777_length_299_cov_659.609848_g3484_i0 PRJEB3181 3777 299 659.609848 1972.23344552 Philodina citrina 468664 Rotifera other_Eukaryota 278 4.21e-70   NTclustered gi|407227484|emb|FR856884.1| 468664 g3484 i0 88.312 17.2073578595318 231 27 77 0 69 299 1539 1309 Philodina citrina complete mitochondrial genome blastn 5145 278 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
22665746 22665746 PRJEB3181_S_NODE_7758_length_225_cov_7.447368_g7465_i0 PRJEB3181 7758 225 7.447368 16.756578 Eurotatoria 2816136 Rotifera other_Eukaryota 416 6.159999999999998e-112   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g7465 i0 100 100.12 225 0 100 0 1 225 177 401 Philodina acuticornis 18S rRNA gene blastn 22527 416 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
23941205 23941205 PRJEB3181_S_NODE_12099_length_185_cov_2.886667_g11806_i0 PRJEB3181 12099 185 2.886667 5.34033395 Eurotatoria 2816136 Rotifera other_Eukaryota 202 1.48e-47   NTclustered gi|402761755|gb|JX184009.1| 104782 g11806 i0 86.74 30.4756756756757 181 24 98 0 5 185 650 470 Adineta vaga cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 5638 204 0.990196078431373 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
25214948 25214948 PRJEB3181_P_NODE_440_length_774_cov_25.710633_g363_i0 PRJEB3181 440 774 25.710633 199.00029942 root 1 Root_unresolved Root_unresolved 327 1.15e-84   NTclustered gi|1399047|gb|U41281.1|PAU41281 44582 g363 i0 99.444 23.2558139534884 180 1 23 0 595 774 1126 947 Philodina acuticornis 18S rRNA gene blastn 18000 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina acuticornis
25214951 25214951 PRJEB3181_P_NODE_7360_length_309_cov_10.809353_g7099_i0 PRJEB3181 7360 309 10.809353 33.40090077 Metazoa 33208 Rotifera other_Eukaryota 555 1.7999999999999994e-153   NTclustered gi|72153731|gb|DQ089739.1| 104782 g7099 i0 99.349 52.8220064724919 307 1 99 1 3 309 1480 1175 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 16322 560 0.991071428571429 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;