RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB3181" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB3181 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1330450 1330450 PRJEB3181_S_NODE_6102_length_249_cov_6.850467_g5809_i0 PRJEB3181 6102 249 6.850467 17.05766283 Rhizomucor pusillus 4840 Fungi Fungi 99 2.85e-16   NTclustered gi|2837748244|ref|XM_069380414.1| 4840 g5809 i0 98.214 3.51807228915663 56 1 22 0 2 57 605 660 Rhizomucor pusillus 40S ribosomal uS13 domain-containing protein (VTP01DRAFT_2000), partial mRNA blastn 876 99 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
3539393 3539393 PRJEB3181_S_NODE_12103_length_185_cov_2.666667_g11810_i0 PRJEB3181 12103 185 2.666667 4.93333395 Fungi 4751 Fungi Fungi 316 5.07e-82   NTclustered gi|158562441|gb|EU195421.1| 4841 g11810 i0 100 92.4324324324324 171 0 92 0 15 185 224 54 Mucor racemosus strain PTCC 5305 clone PM11 28S ribosomal RNA, partial sequence blastn 17100 316 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
21732738 21732738 PRJEB3181_P_NODE_6838_length_319_cov_1.913194_g6577_i0 PRJEB3181 6838 319 1.913194 6.10308886 Rhizophagus irregularis 588596 Fungi Fungi 60.2 1.79e-4   NTclustered gi|1409872934|ref|XM_025326476.1| 588596 g6577 i0 94.737 0.457680250783699 38 2 12 0 204 241 517 554 Rhizophagus irregularis uncharacterized protein (OCT59_005792), partial mRNA blastn 146 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
21732744 21732744 PRJEB3181_P_NODE_7998_length_299_cov_3.119403_g7736_i0 PRJEB3181 7998 299 3.119403 9.32701497 Mucor mucedo 29922 Fungi Fungi 119 2.7e-22   NTclustered gi|2324043403|ref|XM_051594016.1| 29922 g7736 i0 85.714 0.374581939799331 112 16 37 0 9 120 946 1057 Mucor mucedo cystathionine beta-synthase (EV154DRAFT_130786), mRNA blastn 112 119 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
24281704 24281704 PRJEB3181_P_NODE_13260_length_232_cov_4.094527_g12996_i0 PRJEB3181 13260 232 4.094527 9.49930264 Phycomyces blakesleeanus 4837 Fungi Fungi 78.7 3.42e-10   NTclustered gi|1069953767|ref|XM_018429605.1| 763407 g12996 i0 94.118 0.987068965517241 51 3 22 0 87 137 526 576 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 229 78.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;