contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJEB3181" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55973 | 55973 | PRJEB3181_P_NODE_20341_length_182_cov_1.099338_g20077_i0 | PRJEB3181 | 20341 | 182 | 1.099338 | 2.00079516 | Deinococcus sp. QL22 | 2939437 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2238962615|gb|CP097154.1| | 2939437 | g20077 | i0 | 96.875 | 0.351648351648352 | 32 | 1 | 18 | 0 | 129 | 160 | 164633 | 164602 | Deinococcus sp. QL22 plasmid unnamed6, complete sequence | blastn | 64 | 54.7 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. QL22 | ||
| 4816708 | 4816708 | PRJEB3181_P_NODE_844_length_624_cov_366.575042_g723_i0 | PRJEB3181 | 844 | 624 | 366.575042 | 2287.42826208 | Deinococcus | 1298 | Bacteria | Bacteria | 440 | 1.1299999999999999e-118 | NTclustered | gi|470483488|ref|NR_076595.1| | 310783 | g723 | i0 | 83.068 | 456.88782051282 | 502 | 67 | 79 | 14 | 125 | 617 | 2 | 494 | Deinococcus deserti strain VCD115 23S ribosomal RNA gene, complete sequence | blastn | 285098 | 440 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus deserti | ||
| 5158347 | 5158347 | PRJEB3181_P_NODE_6425_length_327_cov_4.716216_g6167_i0 | PRJEB3181 | 6425 | 327 | 4.716216 | 15.42202632 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 560 | 4.13e-155 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g6167 | i0 | 97.554 | 188.850152905199 | 327 | 8 | 100 | 0 | 1 | 327 | 1886414 | 1886088 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 61754 | 560 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 6091930 | 6091930 | PRJEB3181_P_NODE_13305_length_231_cov_503.510000_g13041_i0 | PRJEB3181 | 13305 | 231 | 503.51 | 1163.1081 | Deinococcus | 1298 | Bacteria | Bacteria | 303 | 5.16e-78 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g13041 | i0 | 90.476 | 193.064935064935 | 231 | 21 | 100 | 1 | 1 | 231 | 423543 | 423314 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 44598 | 303 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 8642013 | 8642013 | PRJEB3181_P_NODE_13347_length_231_cov_5.275000_g13083_i0 | PRJEB3181 | 13347 | 231 | 5.275 | 12.18525 | Truepera | 332248 | Bacteria | Bacteria | 320 | 5.12e-83 | NTclustered | gi|2573973991|gb|CP133611.1| | 332249 | g13083 | i0 | 92.76 | 619.528138528139 | 221 | 16 | 96 | 0 | 1 | 221 | 762247 | 762027 | Truepera radiovictrix strain CIP 108686 chromosome, complete genome | blastn | 143111 | 320 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 8983270 | 8983270 | PRJEB3181_S_NODE_8248_length_219_cov_4.592391_g7955_i0 | PRJEB3181 | 8248 | 219 | 4.592391 | 10.05733629 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 361 | 2.83e-95 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g7955 | i0 | 96.364 | 518.269406392694 | 220 | 7 | 100 | 1 | 1 | 219 | 1637693 | 1637912 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 113501 | 361 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 9916999 | 9916999 | PRJEB3181_P_NODE_24208_length_164_cov_2.270677_g23943_i0 | PRJEB3181 | 24208 | 164 | 2.270677 | 3.72391028 | Deinococcus | 1298 | Bacteria | Bacteria | 158 | 2.82e-34 | NTclustered | gi|485099143|ref|NR_102538.1| | 432329 | g23943 | i0 | 87.97 | 53.8170731707317 | 133 | 16 | 81 | 0 | 32 | 164 | 1837 | 1705 | Deinococcus peraridilitoris strain KR-200 23S ribosomal RNA gene, complete sequence | blastn | 8826 | 158 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus peraridilitoris | ||
| 11192230 | 11192230 | PRJEB3181_S_NODE_4309_length_286_cov_1.665339_g4016_i0 | PRJEB3181 | 4309 | 286 | 1.665339 | 4.76286954 | Truepera | 332248 | Bacteria | Bacteria | 385 | 2.29e-102 | NTclustered | gi|2573973991|gb|CP133611.1| | 332249 | g4016 | i0 | 91.756 | 593.91958041958 | 279 | 20 | 97 | 3 | 1 | 278 | 762247 | 761971 | Truepera radiovictrix strain CIP 108686 chromosome, complete genome | blastn | 169861 | 385 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 12809568 | 12809568 | PRJEB3181_S_NODE_11451_length_190_cov_1.787097_g11158_i0 | PRJEB3181 | 11451 | 190 | 1.787097 | 3.3954843 | Deinococcus sp. KNUC1210 | 2917691 | Bacteria | Bacteria | 193 | 9.22e-45 | NTclustered | gi|2197029603|gb|CP092190.1| | 2917691 | g11158 | i0 | 85 | 43.5526315789474 | 200 | 18 | 100 | 9 | 1 | 190 | 1427041 | 1426844 | Deinococcus sp. KNUC1210 chromosome, complete genome | blastn | 8275 | 193 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. KNUC1210 | ||
| 12809617 | 12809617 | PRJEB3181_S_NODE_18011_length_153_cov_2.855932_g17718_i0 | PRJEB3181 | 18011 | 153 | 2.855932 | 4.36957596 | Deinococcus soli (ex Cha et al. 2016) | 1309411 | Bacteria | Bacteria | 241 | 2.49e-59 | NTclustered | gi|821341785|gb|CP011389.1| | 1309411 | g17718 | i0 | 100 | 79.6535947712418 | 130 | 0 | 85 | 0 | 24 | 153 | 1636123 | 1636252 | 'Deinococcus soli' Cha et al. 2014 strain N5, complete genome | blastn | 12187 | 241 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus soli (ex Cha et al. 2016) | ||
| 16291567 | 16291567 | PRJEB3181_S_NODE_3333_length_313_cov_19.953237_g3040_i0 | PRJEB3181 | 3333 | 313 | 19.953237 | 62.45363181 | Deinococcus | 1298 | Bacteria | Bacteria | 507 | 5.2e-139 | NTclustered | gi|1192789104|gb|KY744731.1| | 47478 | g3040 | i0 | 95.847 | 101.380191693291 | 313 | 13 | 100 | 0 | 1 | 313 | 510 | 198 | Deinococcus sp. strain 16B18A 16S ribosomal RNA gene, partial sequence | blastn | 31732 | 512 | 0.990234375 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 16632857 | 16632857 | PRJEB3181_P_NODE_3374_length_412_cov_532.506562_g3140_i0 | PRJEB3181 | 3374 | 412 | 532.506562 | 2193.92703544 | Deinococcus ficus | 317577 | Bacteria | Bacteria | 403 | 9.49e-108 | NTclustered | gi|1220362168|gb|CP021081.1| | 317577 | g3140 | i0 | 95.635 | 121.81067961165 | 252 | 9 | 61 | 2 | 162 | 412 | 2491731 | 2491981 | Deinococcus ficus strain CC-FR2-10, complete genome | blastn | 50186 | 403 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus ficus | ||
| 17566665 | 17566665 | PRJEB3181_S_NODE_10214_length_199_cov_4.079268_g9921_i0 | PRJEB3181 | 10214 | 199 | 4.079268 | 8.11774332 | Deinococcus | 1298 | Bacteria | Bacteria | 331 | 1.9800000000000002e-86 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g9921 | i0 | 96.97 | 245.08040201005 | 198 | 5 | 99 | 1 | 1 | 198 | 74045 | 73849 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 48771 | 331 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 17566672 | 17566672 | PRJEB3181_S_NODE_12894_length_180_cov_1.613793_g12601_i0 | PRJEB3181 | 12894 | 180 | 1.613793 | 2.9048274 | Thermanaerovibrio | 81461 | Bacteria | Bacteria | 104 | 4.16e-18 | NTclustered | gi|470485441|ref|NR_076701.1| | 81462 | g12601 | i0 | 90.909 | 1.71111111111111 | 77 | 7 | 43 | 0 | 84 | 160 | 1468 | 1392 | Thermanaerovibrio acidaminovorans strain Su883 23S ribosomal RNA gene, complete sequence | blastn | 308 | 104 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Thermanaerovibrio | Thermanaerovibrio acidaminovorans | ||
| 19181434 | 19181434 | PRJEB3181_P_NODE_27876_length_151_cov_2.483333_g27611_i0 | PRJEB3181 | 27876 | 151 | 2.483333 | 3.74983283 | Deinococcus irradiatisoli | 2202254 | Bacteria | Bacteria | 263 | 5.23e-66 | NTclustered | gi|1392964945|gb|CP029494.1| | 2202254 | g27611 | i0 | 98.013 | 308.622516556291 | 151 | 3 | 100 | 0 | 1 | 151 | 397529 | 397679 | Deinococcus irradiatisoli strain 17bor-2 chromosome, complete genome | blastn | 46602 | 263 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus irradiatisoli | ||
| 20115333 | 20115333 | PRJEB3181_S_NODE_11976_length_186_cov_1.947020_g11683_i0 | PRJEB3181 | 11976 | 186 | 1.94702 | 3.6214572 | Deinococcus | 1298 | Bacteria | Bacteria | 305 | 1.11e-78 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g11683 | i0 | 100 | 176.279569892473 | 165 | 0 | 89 | 0 | 1 | 165 | 73124 | 72960 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 32788 | 305 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;