RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB3181" and tax_clade = "Provora"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Provora · 2 ✖

bioproject 1

  • PRJEB3181 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7708471 7708471 PRJEB3181_S_NODE_5547_length_258_cov_91.883408_g5254_i0 PRJEB3181 5547 258 91.883408 237.05919264 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 73.1 1.8e-8   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g5254 i0 100 13.9186046511628 39 0 15 0 220 258 7087 7049 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 3591 73.1 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
20456818 20456818 PRJEB3181_P_NODE_9917_length_269_cov_45.348739_g9653_i0 PRJEB3181 9917 269 45.348739 121.98810791 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 76.8 1.46e-9   NTclustered gi|1280963087|gb|MG202010.1| 2044563 g9653 i0 100 13.5204460966543 41 0 15 0 229 269 7087 7047 Ancoracysta twista strain TD-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 3637 76.8 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;