contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJEB30004" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2585592 | 2585592 | PRJEB30004_P_NODE_294743_length_285_cov_2.601626_g279116_i0 | PRJEB30004 | 294743 | 285 | 2.601626 | 7.4146341 | Pendulispora brunnea | 2905690 | Bacteria | Bacteria | 394 | 3.8e-105 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g279116 | i0 | 91.579 | 145.333333333333 | 285 | 24 | 100 | 0 | 1 | 285 | 7408384 | 7408100 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 41420 | 394 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 8641971 | 8641971 | PRJEB30004_P_NODE_686627_length_150_cov_2.234234_g671000_i0 | PRJEB30004 | 686627 | 150 | 2.234234 | 3.351351 | Myxococcales | 29 | Bacteria | Bacteria | 250 | 4.04e-62 | NTclustered | gi|545790931|gb|KF270694.1| | 38 | g671000 | i0 | 96.667 | 268.28 | 150 | 5 | 100 | 0 | 1 | 150 | 748 | 599 | Angiococcus disciformis strain And1 23S ribosomal RNA gene, partial sequence | blastn | 40242 | 250 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium disciforme | ||
| 10242933 | 10242933 | PRJEB30004_P_NODE_390289_length_231_cov_2.088542_g374662_i0 | PRJEB30004 | 390289 | 231 | 2.088542 | 4.82453202 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 204 | 5.3799999999999997e-48 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g374662 | i0 | 82.819 | 35.995670995671 | 227 | 39 | 98 | 0 | 1 | 227 | 4859756 | 4859982 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 8315 | 204 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 10254745 | 10254745 | PRJEB30004_P_NODE_634989_length_160_cov_1.272727_g619362_i0 | PRJEB30004 | 634989 | 160 | 1.272727 | 2.0363632 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 126 | 7.71e-25 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g619362 | i0 | 81.761 | 35.675 | 159 | 22 | 98 | 6 | 4 | 160 | 2650705 | 2650552 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 5708 | 126 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 11519525 | 11519525 | PRJEB30004_P_NODE_415470_length_220_cov_2.425414_g399843_i0 | PRJEB30004 | 415470 | 220 | 2.425414 | 5.3359108 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 124 | 4.07e-24 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g399843 | i0 | 86.607 | 1.02272727272727 | 112 | 15 | 51 | 0 | 106 | 217 | 3054489 | 3054378 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 225 | 124 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 14064170 | 14064170 | PRJEB30004_P_NODE_301032_length_281_cov_1.690083_g285405_i0 | PRJEB30004 | 301032 | 281 | 1.690083 | 4.74913323 | Stigmatella aurantiaca | 41 | Bacteria | Bacteria | 329 | 1.07e-85 | NTclustered | gi|2244675|emb|X87291.1| | 41 | g285405 | i0 | 87.9 | 222.843416370107 | 281 | 32 | 99 | 2 | 2 | 281 | 1211 | 1490 | S.aurantiaca 23S rRNA gene | blastn | 62619 | 329 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 15016317 | 15016317 | PRJEB30004_P_NODE_136132_length_501_cov_5.413420_g120624_i0 | PRJEB30004 | 136132 | 501 | 5.41342 | 27.1212342 | Myxococcia | 32015 | Bacteria | Bacteria | 562 | 1.8299999999999997e-155 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g120624 | i0 | 87.052 | 200.223552894212 | 502 | 59 | 99 | 5 | 1 | 499 | 3942267 | 3941769 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 100312 | 566 | 0.992932862190813 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 15350854 | 15350854 | PRJEB30004_P_NODE_568753_length_174_cov_0.911111_g553126_i0 | PRJEB30004 | 568753 | 174 | 0.911111 | 1.58533314 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 147 | 6.53e-31 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g553126 | i0 | 88.43 | 5.31609195402299 | 121 | 14 | 70 | 0 | 4 | 124 | 6172371 | 6172491 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 925 | 147 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 15354891 | 15354891 | PRJEB30004_P_NODE_652333_length_156_cov_2.820513_g636706_i0 | PRJEB30004 | 652333 | 156 | 2.820513 | 4.40000028 | uncultured Sorangium sp. | 491148 | Bacteria | Bacteria | 215 | 1.55e-51 | NTclustered | gi|310755296|gb|HQ213186.1| | 491148 | g636706 | i0 | 100 | 111.794871794872 | 116 | 0 | 74 | 0 | 1 | 116 | 1114 | 1229 | Uncultured Sorangium sp. clone 3_E21 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 17440 | 215 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | uncultured Sorangium sp. | |||
| 17890164 | 17890164 | PRJEB30004_P_NODE_356735_length_247_cov_13.908654_g341108_i0 | PRJEB30004 | 356735 | 247 | 13.908654 | 34.35437538 | Pendulispora brunnea | 2905690 | Bacteria | Bacteria | 346 | 9.14e-91 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g341108 | i0 | 91.935 | 129.089068825911 | 248 | 18 | 99 | 2 | 2 | 247 | 7408402 | 7408155 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 31885 | 346 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 19180665 | 19180665 | PRJEB30004_P_NODE_84836_length_708_cov_3.847534_g69960_i1 | PRJEB30004 | 84836 | 708 | 3.847534 | 27.24054072 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 780 | 0 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g69960 | i1 | 86.611 | 120.532485875706 | 717 | 82 | 100 | 12 | 1 | 708 | 9853122 | 9852411 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 85337 | 780 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 22989755 | 22989755 | PRJEB30004_P_NODE_340379_length_256_cov_2.926267_g324752_i0 | PRJEB30004 | 340379 | 256 | 2.926267 | 7.49124352 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 274 | 4.5599999999999997e-69 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g324752 | i0 | 86.047 | 135.625 | 258 | 32 | 100 | 4 | 1 | 256 | 3942267 | 3942012 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 34720 | 274 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 24254041 | 24254041 | PRJEB30004_P_NODE_132180_length_512_cov_5.501057_g116707_i0 | PRJEB30004 | 132180 | 512 | 5.501057 | 28.16541184 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 725 | 0 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g116707 | i0 | 92.1 | 156.3515625 | 519 | 33 | 99 | 5 | 2 | 512 | 3942287 | 3942805 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 80052 | 725 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;