contig_metadata
15 rows where analysis = "blastn", bioproject = "PRJEB30004" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2588116 | 2588116 | PRJEB30004_P_NODE_347963_length_252_cov_2.192488_g332336_i0 | PRJEB30004 | 347963 | 252 | 2.192488 | 5.52506976 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 252 | 2.1e-62 | NTclustered | gi|2874254167|emb|OY970399.1| | 171953 | g332336 | i0 | 86.522 | 86.2579365079365 | 230 | 29 | 91 | 2 | 24 | 252 | 308481 | 308709 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.6 genome assembly, chromosome: 1 | blastn | 21737 | 252 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 2604335 | 2604335 | PRJEB30004_P_NODE_686603_length_150_cov_2.297297_g670976_i0 | PRJEB30004 | 686603 | 150 | 2.297297 | 3.4459455 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 141 | 2.53e-29 | NTclustered | gi|2874254120|emb|OY970205.1| | 194844 | g670976 | i0 | 85.714 | 0.886666666666667 | 133 | 19 | 89 | 0 | 16 | 148 | 3606857 | 3606989 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD02248.bin.1.24 genome assembly, chromosome: 1 | blastn | 133 | 141 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 11519451 | 11519451 | PRJEB30004_P_NODE_413890_length_221_cov_1.593407_g398263_i0 | PRJEB30004 | 413890 | 221 | 1.593407 | 3.52142947 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 353 | 4.789999999999999e-93 | NTclustered | gi|2874254057|emb|OY970381.1| | 194844 | g398263 | i0 | 95.495 | 235.619909502262 | 222 | 9 | 100 | 1 | 1 | 221 | 1655552 | 1655773 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD04580.bin.1.19 genome assembly, chromosome: 1 | blastn | 52072 | 353 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 11525574 | 11525574 | PRJEB30004_P_NODE_540810_length_180_cov_2.269504_g525183_i0 | PRJEB30004 | 540810 | 180 | 2.269504 | 4.0851072 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 244 | 2.35e-60 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g525183 | i0 | 91.111 | 133.911111111111 | 180 | 16 | 100 | 0 | 1 | 180 | 4233771 | 4233950 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 24104 | 244 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 12784338 | 12784338 | PRJEB30004_P_NODE_189551_length_393_cov_10.079096_g173935_i0 | PRJEB30004 | 189551 | 393 | 10.079096 | 39.61084728 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 532 | 1.0999999999999996e-146 | NTclustered | gi|2874253760|emb|OY969701.1| | 2283092 | g173935 | i0 | 91.184 | 116.521628498728 | 397 | 28 | 100 | 7 | 1 | 393 | 3176257 | 3176650 | MAG: Pyrinomonadaceae bacterium isolate MFD04212.bin.c.1 genome assembly, chromosome: 1 | blastn | 45793 | 532 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 12797457 | 12797457 | PRJEB30004_P_NODE_468591_length_201_cov_1.691358_g452964_i0 | PRJEB30004 | 468591 | 201 | 1.691358 | 3.39962958 | Candidatus Korobacter versatilis | 658062 | Bacteria | Bacteria | 145 | 2.8e-30 | NTclustered | gi|94549081|gb|CP000360.1| | 204669 | g452964 | i0 | 83.125 | 2.97014925373134 | 160 | 25 | 79 | 2 | 40 | 198 | 3651839 | 3651997 | Candidatus Koribacter versatilis Ellin345, complete genome | blastn | 597 | 145 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Candidatus Korobacteraceae | Candidatus Korobacter | Candidatus Korobacter versatilis | ||
| 15350396 | 15350396 | PRJEB30004_P_NODE_559493_length_176_cov_1.197080_g543866_i0 | PRJEB30004 | 559493 | 176 | 1.19708 | 2.1068608 | Paludibaculum fermentans | 1473598 | Bacteria | Bacteria | 182 | 1.82e-41 | NTclustered | gi|1929489624|gb|CP063849.1| | 1473598 | g543866 | i0 | 86.585 | 72.4715909090909 | 164 | 22 | 93 | 0 | 12 | 175 | 2625018 | 2625181 | Paludibaculum fermentans strain P105 chromosome, complete genome | blastn | 12755 | 182 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Paludibaculum | Paludibaculum fermentans | ||
| 16604034 | 16604034 | PRJEB30004_P_NODE_107134_length_597_cov_24.971326_g92036_i0 | PRJEB30004 | 107134 | 597 | 24.971326 | 149.07881622 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 760 | 0 | NTclustered | gi|389545836|gb|JQ400764.1| | 171953 | g92036 | i0 | 92.844 | 75.8860971524288 | 531 | 27 | 88 | 11 | 1 | 524 | 527 | 1 | Uncultured Acidobacteria bacterium clone CNY_00655 16S ribosomal RNA gene, partial sequence | blastn | 45304 | 760 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 16629914 | 16629914 | PRJEB30004_P_NODE_657694_length_155_cov_3.534483_g642067_i0 | PRJEB30004 | 657694 | 155 | 3.534483 | 5.47844865 | uncultured Candidatus Solibacter sp. | 708629 | Bacteria | Bacteria | 139 | 9.51e-29 | NTclustered | gi|310755104|gb|HQ212994.1| | 708629 | g642067 | i0 | 84.783 | 1.74193548387097 | 138 | 21 | 89 | 0 | 1 | 138 | 1207 | 1070 | Uncultured Candidatus Solibacter sp. clone 2_M07 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 270 | 139 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Solibacteraceae | Candidatus Solibacter | uncultured Candidatus Solibacter sp. | ||
| 19172221 | 19172221 | PRJEB30004_P_NODE_527216_length_184_cov_1.413793_g511589_i0 | PRJEB30004 | 527216 | 184 | 1.413793 | 2.60137912 | Terriglobus roseus | 392734 | Bacteria | Bacteria | 300 | 5.08e-77 | NTclustered | gi|1085637902|emb|LT629690.1| | 392734 | g511589 | i0 | 96.196 | 101.103260869565 | 184 | 5 | 100 | 2 | 1 | 184 | 4808202 | 4808383 | Terriglobus roseus strain GAS232 genome assembly, chromosome: I | blastn | 18603 | 300 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus roseus | ||
| 20452414 | 20452414 | PRJEB30004_P_NODE_628657_length_161_cov_1.344262_g613030_i0 | PRJEB30004 | 628657 | 161 | 1.344262 | 2.16426182 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 137 | 3.59e-28 | NTclustered | gi|2874254091|emb|OY970174.1| | 171953 | g613030 | i0 | 81.988 | 1 | 161 | 29 | 100 | 0 | 1 | 161 | 3629592 | 3629432 | MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 | blastn | 161 | 137 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 21390687 | 21390687 | PRJEB30004_P_NODE_313777_length_272_cov_3.167382_g298150_i0 | PRJEB30004 | 313777 | 272 | 3.167382 | 8.61527904 | Bacteria | 2 | Bacteria | Bacteria | 193 | 1.41e-44 | NTclustered | gi|1015624362|gb|AH012920.2| | 171953 | g298150 | i0 | 87.425 | 63.7279411764706 | 167 | 21 | 61 | 0 | 39 | 205 | 30170 | 30336 | Uncultured Acidobacteria bacterium clone 46h5 hypothetical protein, putative O-linked GlcNAc transferase, putative two-component response regulator, hypothetical protein, putative penicillin-resistance DD-carboxypeptidase, putative glycosyl transferase, hypothetical protein, conserved hypothetical protein, hypothetical protein, putative MaoC family dehydratase, putative D-3-phosphoglycerate dehydrogenase, putative magnesium and cobalt transport protein, putative phosphatidyl-glycerophosphatase, putative 2-methylthioadenine synthetase, hypothetical protein, putative glutamine cyclotransferase, and hypothetical protein genes, complete cds; 5S ribosomal RNA, 23S ribosomal RNA, tRNA-Ala, tRNA-Met, tRNA-Ile, and 16S ribosomal RNA genes, complete sequence; and hypothetical protein genes, complete cds | blastn | 17334 | 193 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24255306 | 24255306 | PRJEB30004_P_NODE_160820_length_444_cov_1.962963_g145231_i0 | PRJEB30004 | 160820 | 444 | 1.962963 | 8.71555572 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 479 | 1.6599999999999993e-130 | NTclustered | gi|2621707050|emb|OY764903.1| | 2212468 | g145231 | i0 | 86.13 | 44.5968468468468 | 447 | 58 | 99 | 4 | 1 | 443 | 3557646 | 3558092 | MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 | blastn | 19801 | 479 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 24266247 | 24266247 | PRJEB30004_P_NODE_396720_length_228_cov_2.142857_g381093_i0 | PRJEB30004 | 396720 | 228 | 2.142857 | 4.88571396 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 228 | 3.1499999999999988e-55 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g381093 | i0 | 85.153 | 280.504385964912 | 229 | 27 | 99 | 7 | 4 | 228 | 4649884 | 4650109 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 63955 | 228 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 25214671 | 25214671 | PRJEB30004_P_NODE_343860_length_254_cov_3.632558_g328233_i0 | PRJEB30004 | 343860 | 254 | 3.632558 | 9.22669732 | Bacteria | 2 | Bacteria | Bacteria | 200 | 7.78e-47 | NTclustered | gi|2874253677|emb|OY969111.1| | 171953 | g328233 | i0 | 84.135 | 239.511811023622 | 208 | 32 | 82 | 1 | 1 | 208 | 712800 | 712594 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 | blastn | 60836 | 200 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;