RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJEB30004" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJEB30004 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
48800 48800 PRJEB30004_P_NODE_569881_length_173_cov_2.141791_g554254_i0 PRJEB30004 569881 173 2.141791 3.70529843 Chrocagost virus 3129398 Viruses Viruses 198 1.7599999999999998e-46   NTclustered gi|2717317482|gb|PP171846.1| 3129398 g554254 i0 87.283 146.21387283237 173 22 100 0 1 173 5858 5686 MAG: Chrocagost virus isolate CC1A_k141_84256 genomic sequence blastn 25295 198 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagost virus
10253006 10253006 PRJEB30004_P_NODE_599329_length_167_cov_1.281250_g583702_i0 PRJEB30004 599329 167 1.28125 2.1396875 Ripastyr virus 3131364 Viruses Viruses 187 3.68e-43   NTclustered gi|2717322326|gb|PP173666.1| 3131364 g583702 i0 88.05 267.245508982036 159 17 95 2 1 158 635 792 MAG: Ripastyr virus isolate MP3_k141_6580 genomic sequence blastn 44630 187 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripastyr virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;