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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 22 ✖

bioproject 1

  • PRJEB29441 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26661 26661 PRJEB29441_P_NODE_39661_length_166_cov_4.905983_g39220_i0 PRJEB29441 39661 166 4.905983 8.14393178 Halococcus dombrowskii 179637 Archaea Archaea 296 5.82e-76   NTclustered gi|2221492933|gb|CP095007.1| 179637 g39220 i0 98.795 164.234939759036 166 2 100 0 1 166 128989 128824 Halococcus dombrowskii strain H4 plasmid unnamed2, complete sequence blastn 27263 296 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
988206 988206 PRJEB29441_P_NODE_1921_length_894_cov_9.429586_g1664_i0 PRJEB29441 1921 894 9.429586 84.30049884 Halococcus 2249 Archaea Archaea 1463 0   NTclustered gi|288192|emb|X72588.1| 2250 g1664 i0 96.201 98.8836689038031 895 33 100 1 1 894 2926 2032 H.morrhuae ribosomal RNA operon and flanking regions blastn 88402 1467 0.997273346966599 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus morrhuae
1301021 1301021 PRJEB29441_P_NODE_43122_length_164_cov_0.886957_g42681_i0 PRJEB29441 43122 164 0.886957 1.45460948 uncultured Methanoregula sp. 1005933 Archaea Archaea 228 2.1199999999999996e-55   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g42681 i0 91.975 28.5670731707317 162 13 99 0 1 162 3147185 3147024 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 4685 228 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
2263586 2263586 PRJEB29441_P_NODE_30822_length_188_cov_6.568345_g30381_i0 PRJEB29441 30822 188 6.568345 12.3484886 Halococcus 2249 Archaea Archaea 278 2.44e-70   NTclustered gi|288192|emb|X72588.1| 2250 g30381 i0 97.531 26.9414893617021 162 4 86 0 1 162 7148 6987 H.morrhuae ribosomal RNA operon and flanking regions blastn 5065 278 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus morrhuae
2576469 2576469 PRJEB29441_P_NODE_32023_length_185_cov_1.448529_g31582_i0 PRJEB29441 32023 185 1.448529 2.67977865 uncultured archaeon 115547 Archaea Archaea 294 2.38e-75   NTclustered gi|166083150|gb|EF022679.1| 115547 g31582 i0 95.676 99.1351351351351 185 5 100 2 1 185 42 223 Uncultured archaeon clone Elev_16S_arch_522 16S ribosomal RNA gene, partial sequence blastn 18340 294 1 Archaea               uncultured archaeon
6091501 6091501 PRJEB29441_P_NODE_46125_length_162_cov_0.902655_g45684_i0 PRJEB29441 46125 162 0.902655 1.4623011 Methanocorpusculum 2192 Archaea Archaea 196 5.89e-46   NTclustered gi|470481509|ref|NR_076479.1| 83984 g45684 i0 88.75 15.2469135802469 160 18 99 0 3 162 313 472 Methanocorpusculum labreanum strain Z 23S ribosomal RNA gene, complete sequence blastn 2470 196 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum labreanum
7678580 7678580 PRJEB29441_P_NODE_18527_length_249_cov_1.785000_g18086_i0 PRJEB29441 18527 249 1.785 4.44465 Halococcus dombrowskii 179637 Archaea Archaea 327 3.34e-85   NTclustered gi|2221492933|gb|CP095007.1| 179637 g18086 i0 90.947 13.3453815261044 243 22 98 0 1 243 129475 129717 Halococcus dombrowskii strain H4 plasmid unnamed2, complete sequence blastn 3323 327 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
10229544 10229544 PRJEB29441_P_NODE_41849_length_165_cov_0.879310_g41408_i0 PRJEB29441 41849 165 0.87931 1.4508615 uncultured archaeon 115547 Archaea Archaea 217 4.619999999999999e-52   NTclustered gi|388254672|gb|JQ768092.1| 115547 g41408 i0 90.361 7.77575757575758 166 15 100 1 1 165 30100 29935 Uncultured archaeon clone 02j05, complete sequence blastn 1283 217 1 Archaea               uncultured archaeon
11191661 11191661 PRJEB29441_P_NODE_38089_length_168_cov_2.361345_g37648_i0 PRJEB29441 38089 168 2.361345 3.9670596 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 305 9.81e-79   NTclustered gi|937513727|gb|CP012850.1| 1353260 g37648 i0 99.405 27.4583333333333 168 1 100 0 1 168 848233 848400 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 4613 305 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
12467287 12467287 PRJEB29441_P_NODE_17890_length_254_cov_1.751220_g17449_i0 PRJEB29441 17890 254 1.75122 4.4480988 Nitrososphaera 497726 Archaea Archaea 448 2.5199999999999996e-121   NTclustered gi|300521484|gb|GU797787.1| 497727 g17449 i0 98.425 41.9055118110236 254 4 100 0 1 254 1992 1739 Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence blastn 10644 448 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
15016159 15016159 PRJEB29441_P_NODE_35572_length_175_cov_1.444444_g35131_i0 PRJEB29441 35572 175 1.444444 2.527777 Nitrososphaera 497726 Archaea Archaea 302 1.33e-77   NTclustered gi|300521484|gb|GU797787.1| 497727 g35131 i0 97.714 43.92 175 4 100 0 1 175 760 934 Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence blastn 7686 302 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
15328808 15328808 PRJEB29441_P_NODE_38253_length_168_cov_1.495798_g37812_i0 PRJEB29441 38253 168 1.495798 2.51294064 Methanobrevibacter sp. YE315 1609968 Archaea Archaea 311 2.11e-80   NTclustered gi|985614202|gb|CP010834.1| 1609968 g37812 i0 100 167 168 0 100 0 1 168 496557 496724 Methanobrevibacter sp. YE315, complete genome blastn 28056 311 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. YE315
16290875 16290875 PRJEB29441_P_NODE_17793_length_255_cov_1.485437_g17352_i0 PRJEB29441 17793 255 1.485437 3.78786435 root 1 Root_unresolved Root_unresolved 466 6.98e-127   NTclustered gi|5725307|emb|AJ009958.1| 66852 g17352 i0 99.608 101 255 1 100 0 1 255 476 730 Methanobrevibacter sp. SM9 16S rRNA gene, partial blastn 25755 466 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
16290937 16290937 PRJEB29441_P_NODE_2713_length_745_cov_10.502874_g2375_i0 PRJEB29441 2713 745 10.502874 78.2464113 Halococcus 2249 Archaea Archaea 1090 0   NTclustered gi|2221492933|gb|CP095007.1| 179637 g2375 i0 96.531 86.0456375838926 663 16 88 6 1 657 127155 127816 Halococcus dombrowskii strain H4 plasmid unnamed2, complete sequence blastn 64104 1090 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
16290959 16290959 PRJEB29441_P_NODE_29873_length_191_cov_4.943662_g29432_i0 PRJEB29441 29873 191 4.943662 9.44239442 Halobacteriales 2235 Archaea Archaea 353 4.02e-93   NTclustered gi|407907317|gb|JX481744.1| 2250 g29432 i0 100 100.026178010471 191 0 100 0 1 191 665 475 Halococcus morrhuae strain 123 16S ribosomal RNA gene, partial sequence blastn 19105 353 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus morrhuae
16291030 16291030 PRJEB29441_P_NODE_40153_length_166_cov_0.871795_g39712_i0 PRJEB29441 40153 166 0.871795 1.4471797 Archaea 2157 Archaea Archaea 176 7.91e-40   NTclustered gi|42557759|emb|AJ627422.1| 29281 g39712 i0 86.061 14.3795180722892 165 21 99 2 1 164 42073 41910 Uncultured crenarchaeote genomic fragment 54d9 blastn 2387 176 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
16291066 16291066 PRJEB29441_P_NODE_44993_length_162_cov_2.097345_g44552_i0 PRJEB29441 44993 162 2.097345 3.3976989 Methanobrevibacter 2172 Archaea Archaea 278 2.04e-70   NTclustered gi|968564921|gb|CP011266.1| 230361 g44552 i0 97.531 79.7160493827161 162 4 100 0 1 162 542686 542525 Methanobrevibacter millerae strain SM9, complete genome blastn 12914 278 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter millerae
16603314 16603314 PRJEB29441_P_NODE_26734_length_203_cov_1.324675_g26293_i0 PRJEB29441 26734 203 1.324675 2.68909025 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 364 2e-96   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g26293 i0 99.015 16.7536945812808 203 2 100 0 1 203 1501902 1501700 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 3401 364 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
19152221 19152221 PRJEB29441_P_NODE_39996_length_166_cov_1.307692_g39555_i0 PRJEB29441 39996 166 1.307692 2.17076872 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 296 5.82e-76   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g39555 i0 98.795 8.84939759036145 166 2 100 0 1 166 1789629 1789794 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 1469 296 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
21703204 21703204 PRJEB29441_P_NODE_25418_length_209_cov_0.950000_g24977_i0 PRJEB29441 25418 209 0.95 1.9855 Haloterrigena alkaliphila 2816475 Archaea Archaea 303 4.58e-78   NTclustered gi|2006064443|gb|CP071462.1| 2816475 g24977 i0 92.891 183.129186602871 211 12 100 3 1 209 1180814 1181023 Haloterrigena alkaliphila strain KZCA68 chromosome, complete genome blastn 38274 303 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Haloterrigena Haloterrigena alkaliphila
25214229 25214229 PRJEB29441_P_NODE_120_length_2913_cov_12.364525_g99_i0 PRJEB29441 120 2913 12.364525 360.17861325 Halococcus 2249 Archaea Archaea 4697 0   NTclustered gi|288192|emb|X72588.1| 2250 g99 i0 95.759 169.861997940268 2924 107 100 15 1 2913 3934 6851 H.morrhuae ribosomal RNA operon and flanking regions blastn 494808 4730 0.993023255813953 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus morrhuae
25214350 25214350 PRJEB29441_P_NODE_29120_length_194_cov_1.537931_g28679_i0 PRJEB29441 29120 194 1.537931 2.98358614 Archaea 2157 Archaea Archaea 353 4.1e-93   NTclustered gi|471647793|gb|KC661570.1| 29281 g28679 i0 99.485 99.9948453608247 194 1 100 0 1 194 710 517 Uncultured crenarchaeote clone BC-J-R-W2-A5 16S ribosomal RNA gene, partial sequence blastn 19399 353 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;