RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB29441 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3852352 3852352 PRJEB29441_P_NODE_10584_length_346_cov_2.575758_g10143_i0 PRJEB29441 10584 346 2.575758 8.91212268 Pandora neoaphidis 76017 Fungi Fungi 628 1.1899999999999997e-175   NTclustered gi|1390219702|gb|MH366634.1| 76017 g10143 i0 99.708 86.0260115606936 343 1 99 0 1 343 70 412 Pandora neoaphidis voucher Number 19 large subunit ribosomal RNA gene, partial sequence blastn 29765 628 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora neoaphidis
5128825 5128825 PRJEB29441_P_NODE_24425_length_213_cov_1.865854_g23984_i0 PRJEB29441 24425 213 1.865854 3.97426902 Zancudomyces culisetae 1213189 Fungi Fungi 89.8 1.43e-13   NTclustered gi|58578567|ref|NC_006837.1| 1213189 g23984 i0 80.159 0.591549295774648 126 20 58 5 64 187 1696 1818 Smittium culisetae mitochondrion, complete genome blastn 126 89.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Zancudomyces Zancudomyces culisetae
11504830 11504830 PRJEB29441_P_NODE_41190_length_165_cov_1.646552_g40749_i0 PRJEB29441 41190 165 1.646552 2.7168108 Pandora neoaphidis 76017 Fungi Fungi 305 9.59e-79   NTclustered gi|302032770|gb|GU132784.1| 76017 g40749 i0 100 70.6181818181818 165 0 100 0 1 165 104 268 Pandora neoaphidis isolate ARSEF 1985 large subunit ribosomal RNA gene, partial sequence blastn 11652 305 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora neoaphidis
12780006 12780006 PRJEB29441_P_NODE_25391_length_209_cov_1.175000_g24950_i0 PRJEB29441 25391 209 1.175 2.45575 Pandora neoaphidis 76017 Fungi Fungi 387 4.42e-103   NTclustered gi|166812027|gb|EU267193.1| 76017 g24950 i0 100 101.373205741627 209 0 100 0 1 209 337 129 Pandora neoaphidis ARSEF 7939 pn7939-3 MboI- pattern 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 25S ribosomal RNA gene, partial sequence blastn 21187 387 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora neoaphidis
19152412 19152412 PRJEB29441_P_NODE_7996_length_408_cov_4.044568_g7557_i0 PRJEB29441 7996 408 4.044568 16.50183744 Pandora neoaphidis 76017 Fungi Fungi 638 2.36e-178   NTclustered gi|166812027|gb|EU267193.1| 76017 g7557 i0 95.134 95.6176470588235 411 8 100 9 1 408 735 1136 Pandora neoaphidis ARSEF 7939 pn7939-3 MboI- pattern 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 25S ribosomal RNA gene, partial sequence blastn 39012 638 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora neoaphidis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;