RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB29441 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11191661 11191661 PRJEB29441_P_NODE_38089_length_168_cov_2.361345_g37648_i0 PRJEB29441 38089 168 2.361345 3.9670596 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 305 9.81e-79   NTclustered gi|937513727|gb|CP012850.1| 1353260 g37648 i0 99.405 27.4583333333333 168 1 100 0 1 168 848233 848400 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 4613 305 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
12467287 12467287 PRJEB29441_P_NODE_17890_length_254_cov_1.751220_g17449_i0 PRJEB29441 17890 254 1.75122 4.4480988 Nitrososphaera 497726 Archaea Archaea 448 2.5199999999999996e-121   NTclustered gi|300521484|gb|GU797787.1| 497727 g17449 i0 98.425 41.9055118110236 254 4 100 0 1 254 1992 1739 Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence blastn 10644 448 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
15016159 15016159 PRJEB29441_P_NODE_35572_length_175_cov_1.444444_g35131_i0 PRJEB29441 35572 175 1.444444 2.527777 Nitrososphaera 497726 Archaea Archaea 302 1.33e-77   NTclustered gi|300521484|gb|GU797787.1| 497727 g35131 i0 97.714 43.92 175 4 100 0 1 175 760 934 Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence blastn 7686 302 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera gargensis
19152221 19152221 PRJEB29441_P_NODE_39996_length_166_cov_1.307692_g39555_i0 PRJEB29441 39996 166 1.307692 2.17076872 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 296 5.82e-76   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g39555 i0 98.795 8.84939759036145 166 2 100 0 1 166 1789629 1789794 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 1469 296 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;