RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB29441 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7678526 7678526 PRJEB29441_P_NODE_15447_length_277_cov_1.605263_g15006_i0 PRJEB29441 15447 277 1.605263 4.44657851 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 222 1.84e-53   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g15006 i0 82.197 10.3393501805054 264 41 94 5 1 259 75407 75669 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 2864 222 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
8953413 8953413 PRJEB29441_P_NODE_22448_length_223_cov_1.718391_g22007_i0 PRJEB29441 22448 223 1.718391 3.83201193 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 263 8.4e-66   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g22007 i0 88.288 58.7488789237668 222 22 98 2 1 218 75448 75669 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 13101 263 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
19151939 19151939 PRJEB29441_P_NODE_23216_length_219_cov_1.800000_g22775_i0 PRJEB29441 23216 219 1.8 3.942 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 213 8.4e-51   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g22775 i0 84.475 44.3561643835616 219 30 100 4 1 219 76759 76545 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 9714 213 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;