RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJEB29441 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1301086 1301086 PRJEB29441_P_NODE_47422_length_161_cov_0.910714_g46981_i0 PRJEB29441 47422 161 0.910714 1.46624954 Potexvirus pepini 3433856 Viruses Viruses 298 1.56e-76   NTclustered gi|1421680372|gb|MH550178.1| 112229 g46981 i0 100 100 161 0 100 0 1 161 84 244 Pepino mosaic virus isolate AG17-12b TGBp1, TGBp2, TGBp3, and CP genes, complete cds blastn 16100 298 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
3852868 3852868 PRJEB29441_P_NODE_39924_length_166_cov_1.452991_g39483_i0 PRJEB29441 39924 166 1.452991 2.41196506 Carlavirus sigmasolani 3427796 Viruses Viruses 302 1.2500000000000001e-77   NTclustered gi|1594663021|gb|MH937416.1| 12169 g39483 i0 99.398 86.7409638554217 166 1 100 0 1 166 1325 1490 Potato virus S isolate PvS-W13-136, complete genome blastn 14399 302 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus sigmasolani
5129033 5129033 PRJEB29441_P_NODE_36005_length_174_cov_1.240000_g35564_i0 PRJEB29441 36005 174 1.24 2.1576 Tolivirales sp. 2809914 Viruses Viruses 300 4.73e-77   NTclustered gi|2647550279|gb|OR843880.1| 2809914 g35564 i0 97.701 1 174 4 100 0 1 174 618 445 Tolivirales sp. strain MR233-17E/17828 RNA-dependent RNA polymerase and hypothetical protein genes, partial cds blastn 174 300 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
12780033 12780033 PRJEB29441_P_NODE_27111_length_201_cov_4.210526_g26670_i0 PRJEB29441 27111 201 4.210526 8.46315726 Hubei sediment luteo-like virus 2 2933247 Viruses Viruses 180 7.69e-41   NTclustered gi|2171145464|gb|MZ218404.1| 2933247 g26670 i0 82.915 1.98009950248756 199 34 99 0 3 201 1290 1488 MAG: Hubei sediment luteo-like virus 2 isolate 84-k141_114889 hypothetical protein 1 and hypothetical protein 2 genes, complete cds; and hypothetical protein 3 gene, partial cds blastn 398 180 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Hubei sediment luteo-like virus 2
14054750 14054750 PRJEB29441_P_NODE_32312_length_184_cov_1.511111_g31871_i0 PRJEB29441 32312 184 1.511111 2.78044424 Tolivirales sp. 2809914 Viruses Viruses 302 1.41e-77   NTclustered gi|2647550279|gb|OR843880.1| 2809914 g31871 i0 96.196 1.6304347826087 184 7 100 0 1 184 471 288 Tolivirales sp. strain MR233-17E/17828 RNA-dependent RNA polymerase and hypothetical protein genes, partial cds blastn 300 302 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
16603694 16603694 PRJEB29441_P_NODE_7674_length_418_cov_3.498645_g7235_i0 PRJEB29441 7674 418 3.498645 14.6243361 Luteoviridae sp. 1955165 Viruses Viruses 222 2.9e-53   NTclustered gi|2171145498|gb|MZ218414.1| 1955165 g7235 i0 77.573 4.48086124401914 379 77 90 8 44 418 1941 2315 MAG: Luteoviridae sp. isolate 248-k141_241782 genomic sequence blastn 1873 222 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Luteoviridae sp.
19151987 19151987 PRJEB29441_P_NODE_26016_length_206_cov_1.547771_g25575_i0 PRJEB29441 26016 206 1.547771 3.18840826 Reagent-associated tombus-like virus 3 2875820 Viruses Viruses 368 1.57e-97   NTclustered gi|2094552978|gb|MZ824227.1| 2875820 g25575 i0 99.029 1 206 1 100 1 1 206 630 834 Reagent-associated tombus-like virus 3 isolate 5 replicase-like gene, partial sequence blastn 206 368 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Reagent-associated tombus-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;