RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB29441 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10229292 10229292 PRJEB29441_P_NODE_27269_length_201_cov_1.342105_g26828_i0 PRJEB29441 27269 201 1.342105 2.69763105 Ceratomyxa ayami 1579381 Cnidaria other_Eukaryota 58.4 3.76e-4   NTclustered gi|730837045|gb|KM392429.1| 1579381 g26828 i0 100 0.437810945273632 31 0 15 0 116 146 1236 1206 Ceratomyxa ayami isolate LJ-Lepto 28S ribosomal RNA gene, partial sequence blastn 88 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Ceratomyxidae Ceratomyxa Ceratomyxa ayami
14054753 14054753 PRJEB29441_P_NODE_32372_length_184_cov_1.392593_g31931_i0 PRJEB29441 32372 184 1.392593 2.56237112 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 104 4.27e-18   NTclustered gi|2729089548|ref|XM_065207423.1| 499914 g31931 i0 87.64 3.48913043478261 89 11 48 0 1 89 226 138 PREDICTED: Rhopilema esculentum tubulin alpha-1 chain (LOC135690017), transcript variant X3, mRNA blastn 642 104 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
20114824 20114824 PRJEB29441_P_NODE_4056_length_602_cov_3.137432_g3649_i0 PRJEB29441 4056 602 3.137432 18.88734064 Anthozoa 6101 Cnidaria other_Eukaryota 344 8.78e-90   NTclustered gi|2689317317|gb|PP410754.1| 1458163 g3649 i0 79.563 78.1428571428571 504 86 82 13 108 602 956 1451 Nicella obesa voucher USNM:1660440 large subunit ribosomal RNA gene, partial sequence blastn 47042 344 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Ellisellidae Nicella Nicella obesa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;