RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB29441 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5129232 5129232 PRJEB29441_P_NODE_48825_length_151_cov_2.127451_g48384_i0 PRJEB29441 48825 151 2.127451 3.21245101 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 154 3.28e-33   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g48384 i0 85.714 144.748344370861 147 20 97 1 1 147 192864 193009 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 21857 154 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
16603093 16603093 PRJEB29441_P_NODE_14674_length_285_cov_3.241525_g14233_i0 PRJEB29441 14674 285 3.241525 9.23834625 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 416 8.1e-112   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g14233 i0 93.007 175.364912280702 286 19 100 1 1 285 812207 812492 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 49979 416 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
16603112 16603112 PRJEB29441_P_NODE_15534_length_276_cov_1.797357_g15093_i0 PRJEB29441 15534 276 1.797357 4.96070532 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 303 6.35e-78   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g15093 i0 88.446 535.474637681159 251 29 91 0 24 274 194878 195128 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 147791 303 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
20427190 20427190 PRJEB29441_P_NODE_27197_length_201_cov_1.947368_g26756_i0 PRJEB29441 27197 201 1.947368 3.91420968 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 182 2.1399999999999996e-41   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g26756 i0 93.548 1.07960199004975 124 4 61 3 4 125 194139 194018 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 217 182 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;