RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB29441 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26877 26877 PRJEB29441_P_NODE_8761_length_386_cov_0.937685_g8320_i0 PRJEB29441 8761 386 0.937685 3.6194641 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 257 7.28e-64   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g8320 i0 88.018 326.341968911917 217 26 56 0 170 386 1478656 1478872 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 125968 257 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
15328915 15328915 PRJEB29441_P_NODE_4673_length_557_cov_3.685039_g4254_i0 PRJEB29441 4673 557 3.685039 20.52566723 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 614 5.579999999999998e-171   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g4254 i0 86.918 256.084380610413 558 59 99 13 5 555 3682661 3682111 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 142639 614 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
17878132 17878132 PRJEB29441_P_NODE_26315_length_205_cov_1.025641_g25874_i0 PRJEB29441 26315 205 1.025641 2.10256405 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 222 1.29e-53   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g25874 i0 87.129 9.13170731707317 202 19 97 7 1 198 597033 597231 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 1872 222 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;