RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB29441 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11504950 11504950 PRJEB29441_P_NODE_5750_length_495_cov_2.356502_g5317_i0 PRJEB29441 5750 495 2.356502 11.6646849 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 344 7.119999999999999e-90   NTclustered gi|2907625638|emb|OZ223198.1| 2447898 g5317 i0 80.297 391.670707070707 472 80 94 10 10 472 1118019 1118486 MAG: Candidatus Kapaibacterium sp. isolate 09316a08-0405-4927-8c64-54324f316411 genome assembly, chromosome: 2 blastn 193877 344 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
14054502 14054502 PRJEB29441_P_NODE_18352_length_250_cov_2.965174_g17911_i0 PRJEB29441 18352 250 2.965174 7.412935 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 185 2.14e-42   NTclustered gi|1869359902|gb|CP058732.1| 2447898 g17911 i0 82.791 131.82 215 30 84 7 1 211 421746 421957 MAG: Candidatus Kapaibacterium sp. isolate Ch6 chromosome, complete genome blastn 32955 185 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
15328407 15328407 PRJEB29441_P_NODE_14033_length_293_cov_1.463115_g13592_i0 PRJEB29441 14033 293 1.463115 4.28692695 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 313 1.13e-80   NTclustered gi|2518551211|emb|OX638338.1| 2447898 g13592 i0 85.953 173.98976109215 299 34 100 4 1 293 2780339 2780043 MAG: Candidatus Kapabacteria bacterium isolate 9634bca7-0036-4470-acfa-8c32e30c46ef genome assembly, chromosome: 1 blastn 50979 313 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;