contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJEB29441" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 988302 | 988302 | PRJEB29441_P_NODE_32261_length_184_cov_1.851852_g31820_i0 | PRJEB29441 | 32261 | 184 | 1.851852 | 3.40740768 | Deinococcus | 1298 | Bacteria | Bacteria | 340 | 2.99e-89 | NTclustered | gi|470478007|ref|NR_076423.1| | 68909 | g31820 | i0 | 100 | 172.423913043478 | 184 | 0 | 100 | 0 | 1 | 184 | 214 | 31 | Deinococcus geothermalis plasmid pDGEO01 strain AG-3a 23S ribosomal RNA gene, complete sequence | blastn | 31726 | 340 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus geothermalis | ||
| 8641367 | 8641367 | PRJEB29441_P_NODE_19187_length_244_cov_1.876923_g18746_i0 | PRJEB29441 | 19187 | 244 | 1.876923 | 4.57969212 | root | 1 | Root_unresolved | Root_unresolved | 446 | 8.639999999999999e-121 | NTclustered | gi|1092183759|dbj|AB862156.1| | 274 | g18746 | i0 | 99.59 | 112 | 244 | 1 | 100 | 0 | 1 | 244 | 327 | 84 | Thermus thermophilus gene for 16S ribosomal RNA, partial sequence, strain: TR2 | blastn | 27328 | 446 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 8641480 | 8641480 | PRJEB29441_P_NODE_31747_length_186_cov_1.116788_g31306_i0 | PRJEB29441 | 31747 | 186 | 1.116788 | 2.07722568 | Bacteria | 2 | Bacteria | Bacteria | 333 | 5.069999999999999e-87 | NTclustered | gi|37223182|gb|AY379549.1| | 274 | g31306 | i0 | 98.925 | 143.204301075269 | 186 | 2 | 100 | 0 | 1 | 186 | 1759 | 1574 | Thermus thermophilus TT700 23S ribosomal RNA, 5S ribosomal RNA, and tRNA-Gly genes, complete sequence | blastn | 26636 | 333 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 9916338 | 9916338 | PRJEB29441_P_NODE_13288_length_302_cov_11.181818_g12847_i0 | PRJEB29441 | 13288 | 302 | 11.181818 | 33.76909036 | Deinococcus | 1298 | Bacteria | Bacteria | 521 | 1.7799999999999999e-143 | NTclustered | gi|1488149667|gb|MK036535.1| | 47478 | g12847 | i0 | 98 | 101.324503311258 | 300 | 6 | 99 | 0 | 1 | 300 | 713 | 414 | Deinococcus sp. strain 16081601 16S ribosomal RNA gene, partial sequence | blastn | 30600 | 521 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 10229561 | 10229561 | PRJEB29441_P_NODE_429_length_1791_cov_4.565442_g351_i0 | PRJEB29441 | 429 | 1791 | 4.565442 | 81.76706622 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 1814 | 0 | NTclustered | gi|2621706202|emb|OY764543.1| | 2026798 | g351 | i0 | 86.524 | 199.908989391401 | 1677 | 193 | 92 | 29 | 83 | 1738 | 2560877 | 2559213 | MAG: Trueperaceae bacterium isolate 617606ba-ac04-44ed-b980-3de5d93b502e genome assembly, chromosome: 1 | blastn | 358037 | 1814 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 11504397 | 11504397 | PRJEB29441_P_NODE_16810_length_263_cov_3.121495_g16369_i0 | PRJEB29441 | 16810 | 263 | 3.121495 | 8.20953185 | Trueperaceae bacterium | 2026798 | Bacteria | Bacteria | 335 | 2.129999999999999e-87 | NTclustered | gi|2621701816|emb|OY759346.1| | 2026798 | g16369 | i0 | 89.695 | 448.923954372624 | 262 | 27 | 99 | 0 | 2 | 263 | 3599969 | 3599708 | MAG: Trueperaceae bacterium isolate dd143a13-9bf8-4812-ba0e-a3cf349d91ff genome assembly, chromosome: 1 | blastn | 118067 | 335 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Trueperaceae bacterium | |||
| 12467249 | 12467249 | PRJEB29441_P_NODE_11970_length_322_cov_1.827839_g11529_i0 | PRJEB29441 | 11970 | 322 | 1.827839 | 5.88564158 | Thermus | 270 | Bacteria | Bacteria | 595 | 1.1099999999999995e-165 | NTclustered | gi|1162503842|gb|KY784655.1| | 275 | g11529 | i0 | 100 | 118.996894409938 | 322 | 0 | 100 | 0 | 1 | 322 | 788 | 467 | Thermus sp. strain C419 16S ribosomal RNA gene, partial sequence | blastn | 38317 | 595 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus sp. | ||
| 13741688 | 13741688 | PRJEB29441_P_NODE_22631_length_222_cov_1.913295_g22190_i0 | PRJEB29441 | 22631 | 222 | 1.913295 | 4.2475149 | Thermus | 270 | Bacteria | Bacteria | 392 | 1.0199999999999999e-104 | NTclustered | gi|470468782|ref|NR_076136.1| | 37636 | g22190 | i0 | 98.649 | 146.09009009009 | 222 | 2 | 100 | 1 | 1 | 222 | 1103 | 1323 | Thermus scotoductus strain SA-01 23S ribosomal RNA gene, complete sequence | blastn | 32432 | 392 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus scotoductus | ||
| 15328953 | 15328953 | PRJEB29441_P_NODE_5573_length_502_cov_269.688742_g5140_i0 | PRJEB29441 | 5573 | 502 | 269.688742 | 1353.83748484 | Deinococcus radiophilus | 32062 | Bacteria | Bacteria | 872 | 0 | NTclustered | gi|2152123021|gb|CP086380.1| | 32062 | g5140 | i0 | 98.016 | 101.378486055777 | 504 | 6 | 100 | 4 | 1 | 502 | 1907242 | 1906741 | Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome | blastn | 50892 | 872 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiophilus | ||
| 16290969 | 16290969 | PRJEB29441_P_NODE_30933_length_188_cov_1.618705_g30492_i0 | PRJEB29441 | 30933 | 188 | 1.618705 | 3.0431654 | Deinococcus | 1298 | Bacteria | Bacteria | 324 | 3.09e-84 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g30492 | i0 | 97.861 | 161.675531914894 | 187 | 4 | 99 | 0 | 2 | 188 | 1792153 | 1792339 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 30395 | 324 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 17566275 | 17566275 | PRJEB29441_P_NODE_6074_length_480_cov_9.095128_g5640_i0 | PRJEB29441 | 6074 | 480 | 9.095128 | 43.6566144 | Deinococcus | 1298 | Bacteria | Bacteria | 726 | 0 | NTclustered | gi|470488003|ref|NR_076846.1| | 55148 | g5640 | i0 | 93.983 | 273.910416666667 | 482 | 25 | 99 | 3 | 1 | 478 | 21 | 502 | Deinococcus proteolyticus strain MRP 23S ribosomal RNA gene, complete sequence | blastn | 131477 | 726 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus proteolyticus | ||
| 17566301 | 17566301 | PRJEB29441_P_NODE_9354_length_372_cov_3.009288_g8913_i0 | PRJEB29441 | 9354 | 372 | 3.009288 | 11.19455136 | Thermanaerovibrio | 81461 | Bacteria | Bacteria | 145 | 5.67e-30 | NTclustered | gi|470485441|ref|NR_076701.1| | 81462 | g8913 | i0 | 75 | 3.86827956989247 | 360 | 67 | 93 | 22 | 3 | 348 | 1742 | 1392 | Thermanaerovibrio acidaminovorans strain Su883 23S ribosomal RNA gene, complete sequence | blastn | 1439 | 145 | 1 | Bacteria | Thermotogati | Synergistota | Synergistia | Synergistales | Synergistaceae | Thermanaerovibrio | Thermanaerovibrio acidaminovorans | ||
| 17877955 | 17877955 | PRJEB29441_P_NODE_16895_length_262_cov_5.568075_g16454_i0 | PRJEB29441 | 16895 | 262 | 5.568075 | 14.5883565 | Deinococcus radiophilus | 32062 | Bacteria | Bacteria | 460 | 3.3499999999999996e-125 | NTclustered | gi|2152123021|gb|CP086380.1| | 32062 | g16454 | i0 | 98.473 | 198.404580152672 | 262 | 3 | 100 | 1 | 1 | 262 | 1814817 | 1815077 | Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome | blastn | 51982 | 460 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiophilus | ||
| 17878539 | 17878539 | PRJEB29441_P_NODE_9455_length_370_cov_2.439252_g9014_i0 | PRJEB29441 | 9455 | 370 | 2.439252 | 9.0252324 | Deinococcus metallilatus | 1211322 | Bacteria | Bacteria | 499 | 1.04e-136 | NTclustered | gi|1609451317|gb|CP038512.1| | 1211322 | g9014 | i0 | 93.713 | 217.045945945946 | 334 | 20 | 90 | 1 | 1 | 334 | 329552 | 329220 | Deinococcus metallilatus strain MA1002 chromosome | blastn | 80307 | 499 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus metallilatus | ||
| 19152339 | 19152339 | PRJEB29441_P_NODE_4756_length_551_cov_18.844622_g4337_i0 | PRJEB29441 | 4756 | 551 | 18.844622 | 103.83386722 | Deinococcus radiophilus | 32062 | Bacteria | Bacteria | 780 | 0 | NTclustered | gi|2152123021|gb|CP086380.1| | 32062 | g4337 | i0 | 92.405 | 273.119782214156 | 553 | 33 | 100 | 7 | 1 | 551 | 1813948 | 1813403 | Deinococcus radiophilus strain ATCC 27603 chromosome, complete genome | blastn | 150489 | 780 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiophilus | ||
| 20114678 | 20114678 | PRJEB29441_P_NODE_17836_length_254_cov_5.195122_g17395_i0 | PRJEB29441 | 17836 | 254 | 5.195122 | 13.19560988 | Truepera | 332248 | Bacteria | Bacteria | 444 | 3.26e-120 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g17395 | i0 | 98.795 | 192.169291338583 | 249 | 3 | 98 | 0 | 1 | 249 | 1932 | 2180 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 48811 | 444 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 20114746 | 20114746 | PRJEB29441_P_NODE_28156_length_197_cov_5.547297_g27715_i0 | PRJEB29441 | 28156 | 197 | 5.547297 | 10.92817509 | Deinococcus | 1298 | Bacteria | Bacteria | 331 | 1.96e-86 | NTclustered | gi|470488003|ref|NR_076846.1| | 55148 | g27715 | i0 | 96.97 | 213.279187817259 | 198 | 5 | 100 | 1 | 1 | 197 | 2624 | 2821 | Deinococcus proteolyticus strain MRP 23S ribosomal RNA gene, complete sequence | blastn | 42016 | 331 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus proteolyticus | ||
| 22978187 | 22978187 | PRJEB29441_P_NODE_10359_length_350_cov_14.787375_g9918_i0 | PRJEB29441 | 10359 | 350 | 14.787375 | 51.7558125 | Deinococcus radiopugnans | 57497 | Bacteria | Bacteria | 588 | 2.0399999999999998e-163 | NTclustered | gi|730601855|gb|CP010028.1| | 57497 | g9918 | i0 | 97.126 | 246.68 | 348 | 10 | 99 | 0 | 3 | 350 | 69372 | 69025 | Deinococcus swuensis strain DY59, complete genome | blastn | 86338 | 588 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiopugnans | ||
| 23940499 | 23940499 | PRJEB29441_P_NODE_11939_length_322_cov_4.655678_g11498_i0 | PRJEB29441 | 11939 | 322 | 4.655678 | 14.99128316 | Deinococcus | 1298 | Bacteria | Bacteria | 584 | 2.41e-162 | NTclustered | gi|2678098150|gb|PP359631.1| | 47478 | g11498 | i0 | 99.379 | 105.152173913043 | 322 | 2 | 100 | 0 | 1 | 322 | 19 | 340 | Deinococcus sp. strain BFCQ1 16S ribosomal RNA gene, partial sequence | blastn | 33859 | 584 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 23940681 | 23940681 | PRJEB29441_P_NODE_36239_length_173_cov_1.645161_g35798_i0 | PRJEB29441 | 36239 | 173 | 1.645161 | 2.84612853 | Truepera | 332248 | Bacteria | Bacteria | 276 | 7.92e-70 | NTclustered | gi|470486385|ref|NR_076754.1| | 332249 | g35798 | i0 | 95.376 | 110.225433526012 | 173 | 8 | 100 | 0 | 1 | 173 | 15 | 187 | Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence | blastn | 19069 | 276 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Trueperales | Trueperaceae | Truepera | Truepera radiovictrix | ||
| 25214520 | 25214520 | PRJEB29441_P_NODE_7240_length_433_cov_314.794271_g6801_i0 | PRJEB29441 | 7240 | 433 | 314.794271 | 1363.05919343 | Deinococcus | 1298 | Bacteria | Bacteria | 773 | 0 | NTclustered | gi|2095695476|gb|OK149243.1| | 47478 | g6801 | i0 | 98.848 | 100.145496535797 | 434 | 4 | 100 | 1 | 1 | 433 | 476 | 43 | Deinococcus sp. strain ATSAR 16S ribosomal RNA gene, partial sequence | blastn | 43363 | 778 | 0.993573264781491 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;