RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB2925" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2925 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11504203 11504203 PRJEB2925_P_NODE_5270_length_588_cov_23.685353_g4242_i0 PRJEB2925 5270 588 23.685353 139.26987564 Conidiobolus coronatus 34488 Fungi Fungi 438 3.8199999999999986e-118   NTclustered gi|44936836|gb|AY546691.1| 34488 g4242 i0 89.076 61.765306122449 357 33 61 5 1 356 2902 2551 Conidiobolus coronatus isolate AFTOL-ID 137 28S large subunit ribosomal RNA gene, partial sequence blastn 36318 438 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus coronatus
14054304 14054304 PRJEB2925_P_NODE_6252_length_524_cov_2.296524_g5142_i0 PRJEB2925 6252 524 2.296524 12.03378576 Linderina pennispora 61395 Fungi Fungi 276 2.8e-69   NTclustered gi|2028325604|ref|XM_040889545.1| 61395 g5142 i0 79.397 75.7328244274809 398 76 75 6 1 395 481 87 Linderina pennispora 40S ribosomal protein S9 (DL89DRAFT_279070), partial mRNA blastn 39684 276 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
17877741 17877741 PRJEB2925_P_NODE_16215_length_245_cov_1.619048_g14937_i0 PRJEB2925 16215 245 1.619048 3.9666676 Kickxella alabastrina 61397 Fungi Fungi 115 2.7800000000000003e-21   NTclustered gi|2324010228|ref|XM_051535463.1| 61397 g14937 i0 98.462 9.94285714285714 65 1 27 0 49 113 504 440 Kickxella alabastrina ribosomal protein S11-domain-containing protein (BX661DRAFT_180397), partial mRNA blastn 2436 115 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;