contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJEB2925" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26107 | 26107 | PRJEB2925_P_NODE_6101_length_533_cov_3.763052_g5002_i0 | PRJEB2925 | 6101 | 533 | 3.763052 | 20.05706716 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 523 | 9.229999999999997e-144 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g5002 | i0 | 85.122 | 320.138836772983 | 531 | 58 | 96 | 11 | 20 | 533 | 3942470 | 3941944 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 170634 | 523 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 1300304 | 1300304 | PRJEB2925_P_NODE_1102_length_2241_cov_946.054850_g835_i0 | PRJEB2925 | 1102 | 2241 | 946.05485 | 21201.0891885 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 3245 | 0 | NTclustered | gi|2809270164|gb|CP102577.1| | 2316736 | g835 | i0 | 96.322 | 216.829094154395 | 1985 | 55 | 88 | 16 | 271 | 2241 | 86976 | 88956 | Corallococcus exercitus strain SDU142 chromosome, complete genome | blastn | 485914 | 3245 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus | ||
| 1300333 | 1300333 | PRJEB2925_P_NODE_1362_length_1740_cov_43.997067_g835_i2 | PRJEB2925 | 1362 | 1740 | 43.997067 | 765.5489658 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 2741 | 0 | NTclustered | gi|2809270164|gb|CP102577.1| | 2316736 | g835 | i2 | 98.893 | 225.981034482759 | 1536 | 15 | 88 | 2 | 1 | 1535 | 88956 | 87422 | Corallococcus exercitus strain SDU142 chromosome, complete genome | blastn | 393207 | 2741 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus | ||
| 6404237 | 6404237 | PRJEB2925_P_NODE_10586_length_349_cov_2.710191_g9314_i0 | PRJEB2925 | 10586 | 349 | 2.710191 | 9.45856659 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 411 | 4.719999999999999e-110 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g9314 | i0 | 87.921 | 51.1174785100287 | 356 | 33 | 100 | 7 | 1 | 349 | 3943132 | 3943484 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 17840 | 411 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 10228882 | 10228882 | PRJEB2925_P_NODE_16989_length_229_cov_2.061856_g15711_i0 | PRJEB2925 | 16989 | 229 | 2.061856 | 4.72165024 | Anaeromyxobacter paludicola | 2918171 | Bacteria | Bacteria | 110 | 1.2e-19 | NTclustered | gi|2199271117|dbj|AP025592.1| | 2918171 | g15711 | i0 | 85.185 | 87.8951965065502 | 108 | 14 | 47 | 2 | 98 | 204 | 1383562 | 1383668 | Anaeromyxobacter paludicola DNA, complete genome | blastn | 20128 | 110 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter paludicola | ||
| 11504244 | 11504244 | PRJEB2925_P_NODE_9530_length_382_cov_2.106628_g8260_i0 | PRJEB2925 | 9530 | 382 | 2.106628 | 8.04731896 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 375 | 1.9e-99 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g8260 | i0 | 83.92 | 104.015706806283 | 398 | 39 | 98 | 8 | 8 | 382 | 3943094 | 3943489 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 39734 | 375 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 14054250 | 14054250 | PRJEB2925_P_NODE_1692_length_1368_cov_42.704426_g835_i3 | PRJEB2925 | 1692 | 1368 | 42.704426 | 584.19654768 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 1853 | 0 | NTclustered | gi|2809270164|gb|CP102577.1| | 2316736 | g835 | i3 | 91.087 | 250.052631578947 | 1380 | 107 | 100 | 11 | 1 | 1368 | 87581 | 88956 | Corallococcus exercitus strain SDU142 chromosome, complete genome | blastn | 342072 | 1853 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus | ||
| 22664931 | 22664931 | PRJEB2925_P_NODE_10658_length_347_cov_4.737179_g9385_i0 | PRJEB2925 | 10658 | 347 | 4.737179 | 16.43801113 | Corallococcus | 83461 | Bacteria | Bacteria | 531 | 3.4599999999999992e-146 | NTclustered | gi|2851136330|gb|CP172866.1| | 184914 | g9385 | i0 | 94.236 | 56.7291066282421 | 347 | 20 | 100 | 0 | 1 | 347 | 2475038 | 2475384 | Corallococcus coralloides strain KYC2213 chromosome, complete genome | blastn | 19685 | 531 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides | ||
| 22978051 | 22978051 | PRJEB2925_P_NODE_1319_length_1794_cov_33.512791_g835_i1 | PRJEB2925 | 1319 | 1794 | 33.512791 | 601.21947054 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 2032 | 0 | NTclustered | gi|2809270164|gb|CP102577.1| | 2316736 | g835 | i1 | 87.196 | 251.376254180602 | 1812 | 201 | 100 | 24 | 1 | 1794 | 88956 | 87158 | Corallococcus exercitus strain SDU142 chromosome, complete genome | blastn | 450969 | 2032 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;