RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJEB2925" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB2925 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1300367 1300367 PRJEB2925_P_NODE_16962_length_230_cov_1.841026_g15684_i0 PRJEB2925 16962 230 1.841026 4.2343598 Radiomyces spectabilis 64574 Fungi Fungi 117 7.18e-22   NTclustered gi|2323731116|ref|XM_051568413.1| 64574 g15684 i0 83.871 38.0652173913044 124 19 54 1 107 230 606 484 Radiomyces spectabilis mitochondrial carrier domain-containing protein (BYT42DRAFT_570633), partial mRNA blastn 8755 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
1300418 1300418 PRJEB2925_P_NODE_6022_length_538_cov_8.775348_g4936_i0 PRJEB2925 6022 538 8.775348 47.21137224 Gigaspora margarita 4874 Fungi Fungi 641 2.4699999999999992e-179   NTclustered gi|658131632|emb|HF968958.1| 4874 g4936 i0 94.09 113.81970260223 423 23 78 2 1 422 2262 1841 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 61235 641 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
3852300 3852300 PRJEB2925_P_NODE_6584_length_505_cov_3.691489_g5445_i0 PRJEB2925 6584 505 3.691489 18.64201945 Lobosporangium transversale 64571 Fungi Fungi 220 1.2799999999999999e-52   NTclustered gi|1227141414|ref|XM_022024615.1| 64571 g5445 i0 87.31 23.2277227722772 197 19 38 5 294 487 214 21 Lobosporangium transversale putative 60S ribosomal protein L27A (BCR41DRAFT_356253), mRNA blastn 11730 220 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
5128442 5128442 PRJEB2925_P_NODE_13185_length_289_cov_2.255906_g11908_i0 PRJEB2925 13185 289 2.255906 6.51956834 Mucor mucedo 29922 Fungi Fungi 143 1.54e-29   NTclustered gi|2324030583|ref|XM_051599362.1| 29922 g11908 i0 87.402 15.9065743944637 127 12 43 4 165 289 690 566 Mucor mucedo 14-3-3 family protein epsilon (EV154DRAFT_489932), mRNA blastn 4597 143 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
10228830 10228830 PRJEB2925_P_NODE_12309_length_306_cov_2.228782_g11033_i0 PRJEB2925 12309 306 2.228782 6.82007292 Mycotypha africana 64632 Fungi Fungi 200 9.63e-47   NTclustered gi|2432561609|ref|XM_053077210.1| 64632 g11033 i0 81.008 35.6699346405229 258 43 83 6 49 303 393 139 Mycotypha africana 40S ribosomal protein S16 (BDF20DRAFT_816965), partial mRNA blastn 10915 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
12779582 12779582 PRJEB2925_P_NODE_10271_length_358_cov_2.046440_g8999_i0 PRJEB2925 10271 358 2.04644 7.3262552 Lichtheimia ornata 688661 Fungi Fungi 126 1.97e-24   NTclustered gi|2553554275|ref|XM_058481583.1| 688661 g8999 i0 87.387 2.24581005586592 111 12 30 2 1 109 196 86 Lichtheimia ornata RING-box protein 1A (O0I10_001488), partial mRNA blastn 804 126 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
12779700 12779700 PRJEB2925_P_NODE_5151_length_597_cov_2.304270_g4135_i0 PRJEB2925 5151 597 2.30427 13.7564919 Mycotypha africana 64632 Fungi Fungi 451 4.98e-122   NTclustered gi|2432558230|ref|XM_053079967.1| 64632 g4135 i0 82.908 81.5092127303183 509 79 85 8 13 517 821 1325 Mycotypha africana translation elongation factor EF-1 alpha (BDF20DRAFT_850565), partial mRNA blastn 48661 451 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
19151582 19151582 PRJEB2925_P_NODE_11156_length_333_cov_1.248322_g9882_i0 PRJEB2925 11156 333 1.248322 4.15691226 Gamsiella multidivaricata 101098 Fungi Fungi 337 7.739999999999998e-88   NTclustered gi|2323771601|ref|XM_051554141.1| 101098 g9882 i0 87.415 54.6786786786787 294 35 88 2 2 294 418 710 Gamsiella multidivaricata WD40 repeat-like protein (BC939DRAFT_440867), mRNA blastn 18208 337 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
22978068 22978068 PRJEB2925_P_NODE_14859_length_263_cov_2.429825_g13581_i0 PRJEB2925 14859 263 2.429825 6.39043975 Mucor mucedo 29922 Fungi Fungi 259 1.32e-64   NTclustered gi|2324032121|ref|XM_051594535.1| 29922 g13581 i0 84.411 133.346007604563 263 41 100 0 1 263 1074 812 Mucor mucedo polyubiquitin (EV154DRAFT_237569), mRNA blastn 35070 259 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;