RNAquarium Metadata Server
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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJEB2925" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 22 ✖

bioproject 1

  • PRJEB2925 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
988077 988077 PRJEB2925_P_NODE_1361_length_1741_cov_3.152989_g1005_i0 PRJEB2925 1361 1741 3.152989 54.89353849 Alphainfluenzavirus 197911 Viruses Viruses 3216 0   NTclustered gi|229892773|gb|GQ132173.1| 644377 g1005 i0 100 100 1741 0 100 0 1 1741 377 2117 Influenza A virus (A/Canada-ON/RV1529/2009(H1N1)) segment 3 polymerase PA (PA) gene, complete cds blastn 174100 3216 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
1300313 1300313 PRJEB2925_P_NODE_1182_length_2034_cov_3.874437_g892_i0 PRJEB2925 1182 2034 3.874437 78.80604858 Zebrafish picornavirus 1 2304617 Viruses Viruses 3404 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g892 i0 96.858 3.00196656833825 2037 61 100 1 1 2034 5783 3747 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 6106 3404 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
1300401 1300401 PRJEB2925_P_NODE_5082_length_602_cov_2.077601_g4072_i0 PRJEB2925 5082 602 2.077601 12.50715802 Zebrafish picornavirus 1 2304617 Viruses Viruses 431 6.549999999999998e-116   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g4072 i0 97.244 2.66445182724252 254 7 89 0 180 433 3126 3379 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1604 431 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
2263355 2263355 PRJEB2925_P_NODE_10662_length_347_cov_3.522436_g9389_i0 PRJEB2925 10662 347 3.522436 12.22285292 Alphainfluenzavirus 197911 Viruses Viruses 436 7.759999999999999e-118   NTclustered gi|2740074559|gb|PP874780.1| 11320 g9389 i0 100 68.8703170028818 236 0 68 0 112 347 126 361 Influenza A virus (A/Colombia/M6406/2016(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence blastn 23898 436 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
2263374 2263374 PRJEB2925_P_NODE_12862_length_295_cov_1.965385_g11585_i0 PRJEB2925 12862 295 1.965385 5.79788575 Alphainfluenzavirus 197911 Viruses Viruses 326 1.46e-84   NTclustered gi|2449947150|gb|OQ535201.1| 11320 g11585 i0 100 98.3932203389831 176 0 100 0 120 295 682 507 Influenza A virus (A/USA/8A3/2011(H1N1)) segment 6 neuraminidase (NA) gene, complete cds blastn 29026 327 0.996941896024465 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
2263432 2263432 PRJEB2925_P_NODE_8002_length_440_cov_4.355556_g6782_i0 PRJEB2925 8002 440 4.355556 19.1644464 Alphainfluenzavirus 197911 Viruses Viruses 680 0   NTclustered gi|2624562272|gb|OR874284.1| 11320 g6782 i0 99.73 87.4590909090909 371 1 84 0 70 440 1289 919 Influenza A virus (A/Kenya/CDC-Nyeri/002/2009(H1N1)) segment 6 neuraminidase (NA) gene, complete cds blastn 38482 686 0.991253644314869 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
2576036 2576036 PRJEB2925_P_NODE_8143_length_435_cov_1.750000_g6916_i0 PRJEB2925 8143 435 1.75 7.6125 Zebrafish picornavirus 1 2304617 Viruses Viruses 505 2.68e-138   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g6916 i0 96.7 2.58850574712644 303 10 70 0 133 435 1985 2287 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1126 505 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
3538658 3538658 PRJEB2925_P_NODE_1203_length_1999_cov_3.382892_g904_i0 PRJEB2925 1203 1999 3.382892 67.62401108 Alphainfluenzavirus 197911 Viruses Viruses 2963 0   NTclustered gi|1920167247|gb|MW185783.1| 11320 g904 i0 98.188 97.3856928464232 1711 3 96 9 74 1768 2232 534 Influenza A virus (A/Lithuania/1167/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds blastn 194674 2968 0.998315363881402 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
3538665 3538665 PRJEB2925_P_NODE_1443_length_1617_cov_2.952592_g1063_i0 PRJEB2925 1443 1617 2.952592 47.74341264 Alphainfluenzavirus 197911 Viruses Viruses 2032 0   NTclustered gi|2332152027|gb|OP862000.1| 11320 g1063 i0 96.617 87.2467532467532 1212 24 86 2 108 1302 128 1339 Influenza A virus (A/Nepal/FLUNP09A-394/2009(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds blastn 141078 2049 0.99170326988775 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
3852275 3852275 PRJEB2925_P_NODE_4644_length_636_cov_2.234609_g3684_i0 PRJEB2925 4644 636 2.234609 14.21211324 Zebrafish picornavirus 1 2304617 Viruses Viruses 715 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g3684 i0 94.255 2.95911949685535 470 24 98 3 1 467 2910 3379 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1882 715 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
6091202 6091202 PRJEB2925_P_NODE_17365_length_208_cov_4.109827_g16087_i0 PRJEB2925 17365 208 4.109827 8.54844016 Alphainfluenzavirus 197911 Viruses Viruses 385 1.58e-102   NTclustered gi|2810150290|gb|PQ384650.1| 11320 g16087 i0 100 100 208 0 100 0 1 208 2166 1959 Influenza A virus (A/mus musculus/Ohio/H1N1_Parent_PB1_consensus/2023(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence blastn 20800 385 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
7678324 7678324 PRJEB2925_P_NODE_13307_length_286_cov_7.378486_g12030_i0 PRJEB2925 13307 286 7.378486 21.10246996 Mitovirus sp. 2587224 Viruses Viruses 171 6.99e-38   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g12030 i0 94.545 3.27622377622378 110 6 38 0 1 110 3 112 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 937 171 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
8953081 8953081 PRJEB2925_P_NODE_14608_length_266_cov_2.688312_g13330_i0 PRJEB2925 14608 266 2.688312 7.15090992 Zebrafish picornavirus 1 2304617 Viruses Viruses 431 2.67e-116   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g13330 i0 95.865 2.9887218045112798 266 11 100 0 1 266 2913 2648 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 795 431 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
15015924 15015924 PRJEB2925_P_NODE_12792_length_296_cov_4.111111_g11515_i0 PRJEB2925 12792 296 4.111111 12.16888856 Alphainfluenzavirus 197911 Viruses Viruses 412 1.0899999999999999e-110   NTclustered gi|2624562240|gb|OR874268.1| 11320 g11515 i0 100 75.8243243243243 223 0 75 0 1 223 354 132 Influenza A virus (A/Kenya/CDC-Nakuru/094/2009(H1N1)) segment 6 neuraminidase (NA) gene, complete cds blastn 22444 412 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
15015943 15015943 PRJEB2925_P_NODE_2412_length_1009_cov_5.626283_g1796_i0 PRJEB2925 2412 1009 5.626283 56.76919547 Alphainfluenzavirus 197911 Viruses Viruses 1626 0   NTclustered gi|1059146602|gb|GQ360066.2| 657546 g1796 i0 99.887 89.6778989098117 883 1 91 0 107 989 142 1024 Influenza A virus (A/Stockholm/32/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds blastn 90485 1633 0.995713410900184 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
16290780 16290780 PRJEB2925_P_NODE_3113_length_835_cov_6.588750_g2374_i0 PRJEB2925 3113 835 6.58875 55.0160625 Alphainfluenzavirus 197911 Viruses Viruses 1254 0   NTclustered gi|1408060286|gb|MH328713.1| 11320 g2374 i0 100 84.9724550898204 679 0 81 0 72 750 776 98 Influenza A virus (A/Taiwan/90001/2010(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds blastn 70952 1256 0.998407643312102 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
16290811 16290811 PRJEB2925_P_NODE_8653_length_414_cov_4.823219_g7403_i0 PRJEB2925 8653 414 4.823219 19.96812666 Alphainfluenzavirus 197911 Viruses Viruses 645 1.4399999999999993e-180   NTclustered gi|257472135|gb|CY045241.1| 669985 g7403 i0 96.345 82.3574879227053 383 11 92 1 22 401 1 383 Influenza A virus (A/Taiwan/137/2009(H1N1)) segment 3 sequence blastn 34096 651 0.990783410138249 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
17565956 17565956 PRJEB2925_P_NODE_1774_length_1315_cov_2.360156_g1311_i0 PRJEB2925 1774 1315 2.360156 31.0360514 Alphainfluenzavirus 197911 Viruses Viruses 2211 0   NTclustered gi|1408061143|gb|MH328801.1| 11320 g1311 i0 99.917 91.280608365019 1200 1 91 0 116 1315 145 1344 Influenza A virus (A/Taiwan/02727/2009(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds blastn 120034 2217 0.997293640054127 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
20426742 20426742 PRJEB2925_P_NODE_1057_length_2387_cov_6.837160_g799_i0 PRJEB2925 1057 2387 6.83716 163.2030092 Zebrafish picornavirus 1 2304617 Viruses Viruses 4013 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g799 i0 97.848 3.10808546292417 2323 50 100 0 1 2323 5811 8133 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 7419 4013 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
21390254 21390254 PRJEB2925_P_NODE_1817_length_1288_cov_2.887470_g904_i1 PRJEB2925 1817 1288 2.88747 37.1906136 Alphainfluenzavirus 197911 Viruses Viruses 1620 0   NTclustered gi|1920167247|gb|MW185783.1| 11320 g904 i1 98.083 90.8501552795031 939 2 90 8 1 923 1472 534 Influenza A virus (A/Lithuania/1167/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds blastn 117015 1626 0.996309963099631 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
22664948 22664948 PRJEB2925_P_NODE_12698_length_298_cov_2.235741_g11421_i0 PRJEB2925 12698 298 2.235741 6.66250818 Alphainfluenzavirus 197911 Viruses Viruses 327 4.11e-85   NTclustered gi|2449947150|gb|OQ535201.1| 11320 g11421 i0 100 99.996644295302 177 0 100 0 122 298 683 507 Influenza A virus (A/USA/8A3/2011(H1N1)) segment 6 neuraminidase (NA) gene, complete cds blastn 29799 327 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
24251845 24251845 PRJEB2925_P_NODE_10680_length_347_cov_1.685897_g9407_i0 PRJEB2925 10680 347 1.685897 5.85006259 Zebrafish picornavirus 1 2304617 Viruses Viruses 348 3.74e-91   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g9407 i0 98.477 2.11239193083573 197 3 57 0 151 347 3774 3578 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 733 348 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;