RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB28589" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB28589 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1300224 1300224 PRJEB28589_S_NODE_1862_length_423_cov_1.981383_g1754_i0 PRJEB28589 1862 423 1.981383 8.38125009 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 52.8 0.041   NTclustered gi|2202666560|ref|XR_006951441.1| 2897299 g1754 i0 100 0.066193853427896 28 0 7 0 1 28 1 28 PREDICTED: Xenia sp. Carnegie-2017 uncharacterized LOC124454405 (LOC124454405), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
6404160 6404160 PRJEB28589_S_NODE_15926_length_179_cov_1.537879_g15818_i0 PRJEB28589 15926 179 1.537879 2.75280341 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 52.8 0.015   NTclustered gi|2202666560|ref|XR_006951441.1| 2897299 g15818 i0 100 0.156424581005587 28 0 16 0 1 28 1 28 PREDICTED: Xenia sp. Carnegie-2017 uncharacterized LOC124454405 (LOC124454405), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
24251738 24251738 PRJEB28589_S_NODE_1060_length_516_cov_28.066098_g957_i0 PRJEB28589 1060 516 28.066098 144.82106568 Eunicella cavolini 317547 Cnidaria other_Eukaryota 56.5 0.004   NTclustered gi|2918369535|emb|OZ237717.1| 317547 g957 i0 100 0.0581395348837209 30 0 6 0 459 488 36194299 36194270 Eunicella cavolini genome assembly, chromosome: 1 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;