RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB28062" and tax_phylum = "Preplasmiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB28062 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11190307 11190307 PRJEB28062_P_NODE_118609_length_264_cov_1.602094_g116246_i0 PRJEB28062 118609 264 1.602094 4.22952816 root 1 Root_unresolved Root_unresolved 488 1.5499999999999999e-133   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g116246 i0 100 100 264 0 100 0 1 264 14740 15003 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 26400 488 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
16290035 16290035 PRJEB28062_P_NODE_32053_length_649_cov_11.012153_g29752_i0 PRJEB28062 32053 649 11.012153 71.46887297 root 1 Root_unresolved Root_unresolved 1107 0   NTclustered gi|56160492|ref|AC_000007.1| 10515 g29752 i0 100 92.2973805855162 599 0 92 0 24 622 11556 12154 Human adenovirus 2, complete genome blastn 59901 1107 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
18838927 18838927 PRJEB28062_P_NODE_16275_length_942_cov_4.337169_g14361_i0 PRJEB28062 16275 942 4.337169 40.85613198 root 1 Root_unresolved Root_unresolved 1661 0   NTclustered gi|2079660852|emb|OU501478.1| 10515 g14361 i0 100 95.4363057324841 899 0 95 0 22 920 17381 18279 Human adenovirus 2 isolate ADVJA-00-BE genome assembly, chromosome: ADVJA-00-BE blastn 89901 1661 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;