RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJEB28062" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB28062 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16600681 16600681 PRJEB28062_P_NODE_121774_length_256_cov_3.153005_g119410_i0 PRJEB28062 121774 256 3.153005 8.0716928 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 339 1.5999999999999998e-88   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g119410 i0 92.735 82.86328125 234 17 91 0 1 234 962529 962762 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 21213 339 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;