RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJEB28062" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 11 ✖

bioproject 1

  • PRJEB28062 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2575679 2575679 PRJEB28062_P_NODE_93343_length_335_cov_1.114504_g90981_i0 PRJEB28062 93343 335 1.114504 3.7335884 Erythroparvovirus ungulate1 3052194 Viruses Viruses 614 3.209999999999999e-171   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g90981 i0 99.701 7 335 1 100 0 1 335 4700 5034 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 2345 614 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
4815305 4815305 PRJEB28062_P_NODE_40804_length_568_cov_31.870707_g38470_i0 PRJEB28062 40804 568 31.870707 181.02561576 Gammapapillomavirus 325455 Viruses Viruses 950 0   NTclustered gi|916345887|gb|KP692118.1| 10566 g38470 i0 99.426 5.79753521126761 523 3 92 0 23 545 4928 4406 Human papillomavirus isolate SE383, complete genome blastn 3293 950 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
7678078 7678078 PRJEB28062_P_NODE_95447_length_328_cov_9.854902_g93085_i0 PRJEB28062 95447 328 9.854902 32.32407856 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.031   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g93085 i0 100 0.0853658536585366 28 0 9 0 1 28 3116 3089 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
8640372 8640372 PRJEB28062_P_NODE_19687_length_847_cov_6.257106_g17652_i0 PRJEB28062 19687 847 6.257106 52.99768782 Gammapapillomavirus 325455 Viruses Viruses 1480 0   NTclustered gi|1559669679|gb|MH777180.2| 10566 g17652 i0 99.876 4.86776859504132 804 1 95 0 23 826 4119 3316 MAG: Human papillomavirus isolate HPV-mSK_032, complete genome blastn 4123 1480 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
8952878 8952878 PRJEB28062_P_NODE_97088_length_323_cov_47.024000_g94726_i0 PRJEB28062 97088 323 47.024 151.88752 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.03   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g94726 i0 96.774 0.0959752321981424 31 1 10 0 1 31 3116 3086 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 31 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
16290204 16290204 PRJEB28062_P_NODE_47733_length_519_cov_2.652466_g45387_i0 PRJEB28062 47733 519 2.652466 13.76629854 Gemykrogvirus 1985367 Viruses Viruses 898 0   NTclustered gi|746815432|ref|NC_026144.1| 1519399 g45387 i0 99.197 7.02312138728324 498 4 96 0 1 498 551 54 Sewage-associated gemycircularvirus-4 isolate BS3913, complete sequence blastn 3645 898 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus Gemykrogvirus sewopo1
16600512 16600512 PRJEB28062_P_NODE_112654_length_279_cov_3.067961_g110291_i0 PRJEB28062 112654 279 3.067961 8.55961119 Parvovirus macaca3116 3117124 Viruses Viruses 52.8 0.026   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g110291 i0 96.875 0.114695340501792 32 0 11 1 1 31 2 33 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 32 52.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
16600924 16600924 PRJEB28062_P_NODE_136954_length_208_cov_12.748148_g134590_i0 PRJEB28062 136954 208 12.748148 26.51614784 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.005   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g134590 i0 100 0.139423076923077 29 0 14 0 1 29 3116 3088 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 29 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
16602435 16602435 PRJEB28062_P_NODE_84334_length_363_cov_3.127586_g81972_i0 PRJEB28062 84334 363 3.127586 11.35313718 Erythroparvovirus ungulate1 3052194 Viruses Viruses 488 2.21e-133   NTclustered gi|1333742271|gb|MG026728.1| 172297 g81972 i0 98.551 6.57300275482094 276 4 88 0 43 318 5058 5333 Bovine parvovirus 3 isolate ujs497 nonstructural protein and structural protein genes, complete cds blastn 2386 488 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
19151335 19151335 PRJEB28062_P_NODE_94176_length_332_cov_3.803089_g91814_i0 PRJEB28062 94176 332 3.803089 12.62625548 Emberiza chrysophrys CRESS-DNA-virus sp. 2815029 Viruses Viruses 178 4.95e-40   NTclustered gi|2015371919|gb|MW182746.1| 2815029 g91814 i0 85 40.7801204819277 180 21 53 5 46 222 1407 1583 MAG: Emberiza chrysophrys CRESS-DNA-virus sp. isolate ybb150cir4 genomic sequence, sequence blastn 13539 178 1 Viruses   Shotokuvirae Cressdnaviricota         Emberiza chrysophrys CRESS-DNA-virus sp.
24250331 24250331 PRJEB28062_P_NODE_30220_length_670_cov_42.946399_g27933_i0 PRJEB28062 30220 670 42.946399 287.7408733 Red panda feces-associated circular DNA virus 17 2863970 Viruses Viruses 141 1.38e-28   NTclustered gi|2099633191|gb|MZ556186.1| 2863970 g27933 i0 84.828 0.21641791044776101 145 16 21 5 56 197 4460 4601 Red panda feces-associated circular DNA virus 17 isolate Rpf280cress07-12 genomic sequence blastn 145 141 1 Viruses   Shotokuvirae Cressdnaviricota         Red panda feces-associated circular DNA virus 17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;