RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJEB28062" and tax_kingdom = "Promethearchaeati"

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tax_superkingdom 1

tax_kingdom 1

  • Promethearchaeati · 1 ✖

bioproject 1

  • PRJEB28062 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10228621 10228621 PRJEB28062_P_NODE_96809_length_324_cov_9.625498_g94447_i0 PRJEB28062 96809 324 9.625498 31.18661352 Candidatus Heimdallarchaeum aukensis 2876573 Archaea Archaea 52.8 0.03   NTclustered gi|2180467162|gb|CP084166.1| 2876573 g94447 i0 100 0.0864197530864197 28 0 9 0 259 286 721604 721577 MAG: Candidatus Heimdallarchaeum aukensis isolate PM71 chromosome, complete genome blastn 28 52.8 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota Candidatus Heimdallarchaeia (ex Rinke et al. 2021) (nom. nud.) Candidatus Heimdallarchaeales Candidatus Heimdallarchaeaceae Candidatus Heimdallarchaeum Candidatus Heimdallarchaeum aukensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;