RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJEB27957" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB27957 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2573337 2573337 PRJEB27957_P_NODE_56763_length_221_cov_0.726744_g56653_i0 PRJEB27957 56763 221 0.726744 1.60610424 Hygrocybe coccinea 378274 Fungi Fungi 303 4.9e-78   NTclustered gi|2586993227|emb|OY742001.1| 378274 g56653 i0 91.781 99.0678733031674 219 17 99 1 1 219 34840 35057 Hygrocybe coccinea genome assembly, organelle: mitochondrion blastn 21894 303 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Hygrophoraceae Hygrocybe Hygrocybe coccinea
3849617 3849617 PRJEB27957_P_NODE_98084_length_173_cov_1.677419_g97974_i0 PRJEB27957 98084 173 1.677419 2.90193487 Lactarius trivialis 217427 Fungi Fungi 54.7 0.004   NTclustered gi|2091527986|ref|NC_057510.1| 217427 g97974 i0 96.875 0.184971098265896 32 1 18 0 9 40 27959 27990 Lactarius trivialis mitochondrion, complete genome blastn 32 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Russulaceae Lactarius Lactarius trivialis
13740312 13740312 PRJEB27957_P_NODE_92471_length_179_cov_1.200000_g92361_i0 PRJEB27957 92471 179 1.2 2.148 Malassezia 55193 Fungi Fungi 331 1.74e-86   NTclustered gi|1321659599|gb|KY911093.1| 76775 g92361 i0 100 44.804469273743 179 0 100 0 1 179 32074 31896 Malassezia restricta mitochondrion, complete genome blastn 8020 331 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
15014697 15014697 PRJEB27957_P_NODE_106012_length_168_cov_1.193277_g105902_i0 PRJEB27957 106012 168 1.193277 2.00470536 Hymenochaetaceae 40424 Fungi Fungi 52.8 0.014   NTclustered gi|2459374072|ref|NC_072248.1| 40471 g105902 i0 100 0.333333333333333 28 0 17 0 29 56 49420 49393 Fuscoporia gilva mitochondrion, complete genome blastn 56 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Fuscoporia Fuscoporia gilva
16600190 16600190 PRJEB27957_P_NODE_111474_length_166_cov_1.333333_g111364_i0 PRJEB27957 111474 166 1.333333 2.21333278 Tricholoma myomyces 54549 Fungi Fungi 58.4 2.99e-4   NTclustered gi|359744923|gb|JN389325.1| 54549 g111364 i0 100 0.373493975903614 31 0 19 0 120 150 411 381 Tricholoma myomyces voucher MICH68589 25S ribosomal RNA gene, partial sequence; ribosomal intergenic spacer, complete sequence; and 5S ribosomal RNA gene, partial sequence blastn 62 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Tricholomataceae Tricholoma Tricholoma myomyces
20424123 20424123 PRJEB27957_P_NODE_64017_length_210_cov_1.937888_g63907_i0 PRJEB27957 64017 210 1.937888 4.0695648 Flammulina velutipes 38945 Fungi Fungi 52.8 0.018   NTclustered gi|511347638|ref|NC_021373.1| 38945 g63907 i0 100 0.666666666666667 28 0 13 0 14 41 14632 14605 Flammulina velutipes strain 4019-20 mitochondrion, complete genome blastn 140 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Flammulina Flammulina velutipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;