RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB27957" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJEB27957 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13740249 13740249 PRJEB27957_P_NODE_102971_length_169_cov_1.300000_g102861_i0 PRJEB27957 102971 169 1.3 2.197 Orthornavirae 2732396 Viruses Viruses 69.4 1.4e-7   NTclustered gi|2183423903|gb|MZ679790.1| 2027243 g102861 i0 97.5 7.98816568047337 40 1 24 0 130 169 3167 3206 MAG: Leviviridae sp. isolate R28-k141_67620 genomic sequence blastn 1350 69.4 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
15325561 15325561 PRJEB27957_P_NODE_109413_length_167_cov_0.881356_g109303_i0 PRJEB27957 109413 167 0.881356 1.47186452 Botourmiaviridae sp. 2808997 Viruses Viruses 117 4.900000000000001e-22   NTclustered gi|2396039588|gb|ON812873.1| 2808997 g109303 i0 80.368 0.976047904191617 163 24 95 7 1 159 1260 1102 MAG: Botourmiaviridae sp. isolate TIGMIC_5, complete genome blastn 163 117 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
20424102 20424102 PRJEB27957_P_NODE_26197_length_297_cov_10.806452_g26087_i0 PRJEB27957 26197 297 10.806452 32.09516244 Lagomorph hepacivirus 3138818 Viruses Viruses 52.8 0.028   NTclustered gi|2716363320|gb|OQ576737.1| 3138818 g26087 i0 100 0.0942760942760943 28 0 9 0 100 127 2440 2467 Lagomorph hepacivirus isolate USA/CA/Orange/30026-1/2020 polyprotein gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Lagomorph hepacivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;