RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJEB25789" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB25789 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15325393 15325393 PRJEB25789_S_NODE_20353_length_235_cov_2.851852_g20274_i0 PRJEB25789 20353 235 2.851852 6.7018522 Cystobasidium minutum 29899 Fungi Fungi 198 2.56e-46   NTclustered gi|2781610320|ref|XM_066965710.1| 1397322 g20274 i0 86.264 24.8765957446809 182 25 77 0 1 182 1092 911 Cystobasidium minutum MCA 4210 putative ATP2-F1F0-ATPase complex, F1 beta subunit (P389DRAFT_172179), mRNA blastn 5846 198 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium minutum
19148535 19148535 PRJEB25789_S_NODE_12056_length_284_cov_2.137441_g11977_i0 PRJEB25789 12056 284 2.137441 6.07033244 Kwoniella dendrophila 4975 Fungi Fungi 211 4.09e-50   NTclustered gi|2752982483|ref|XM_066217289.1| 1295534 g11977 i0 82.4 12.0246478873239 250 37 87 7 3 249 323 78 Kwoniella dendrophila CBS 6074 60S ribosomal protein L44 (L201_001500), partial mRNA blastn 3415 211 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella dendrophila
24248919 24248919 PRJEB25789_S_NODE_13380_length_273_cov_1.540000_g13301_i0 PRJEB25789 13380 273 1.54 4.2042 Kwoniella dendrophila 4975 Fungi Fungi 176 1.43e-39   NTclustered gi|2752998205|ref|XM_066219914.1| 1295534 g13301 i0 81.034 99.1904761904762 232 35 84 7 45 273 229 4 Kwoniella dendrophila CBS 6074 ubiquitin-60S ribosomal protein L40 (L201_004168), partial mRNA blastn 27079 176 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella dendrophila
24249127 24249127 PRJEB25789_S_NODE_6380_length_362_cov_2.228374_g6301_i0 PRJEB25789 6380 362 2.228374 8.06671388 Malassezia restricta 76775 Fungi Fungi 669 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g6301 i0 100 106.649171270718 362 0 100 0 1 362 1502 1863 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 38607 669 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;