contig_metadata
54 rows where analysis = "blastn", bioproject = "PRJEB25583" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2261731 | 2261731 | PRJEB25583_P_NODE_2902_length_238_cov_1.870647_g2725_i0 | PRJEB25583 | 2902 | 238 | 1.870647 | 4.45213986 | Xanthomonas | 338 | Bacteria | Bacteria | 67.6 | 7.63e-7 | NTclustered | gi|2273560659|gb|CP101174.1| | 340 | g2725 | i0 | 84.058 | 0.869747899159664 | 69 | 11 | 29 | 0 | 154 | 222 | 4514099 | 4514167 | Xanthomonas campestris pv. campestris strain CN07 chromosome, complete genome | blastn | 207 | 67.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas campestris | ||
| 2261758 | 2261758 | PRJEB25583_P_NODE_5322_length_178_cov_4.666667_g5145_i0 | PRJEB25583 | 5322 | 178 | 4.666667 | 8.30666726 | Rhizobiaceae | 82115 | Bacteria | Bacteria | 159 | 8.629999999999998e-35 | NTclustered | gi|1867905451|dbj|AP023269.1| | 373 | g5145 | i0 | 97.826 | 98.7696629213483 | 92 | 2 | 52 | 0 | 87 | 178 | 221634 | 221725 | Agrobacterium vitis VAR03-1 DNA, chromosome 2, complete sequence | blastn | 17581 | 159 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Agrobacterium | Agrobacterium vitis | ||
| 2261764 | 2261764 | PRJEB25583_P_NODE_5682_length_174_cov_1.116788_g5505_i0 | PRJEB25583 | 5682 | 174 | 1.116788 | 1.94321112 | Methylorubrum | 2282523 | Bacteria | Bacteria | 224 | 2.93e-54 | NTclustered | gi|1315671047|emb|LT962688.1| | 408 | g5505 | i0 | 93.377 | 10.2931034482759 | 151 | 10 | 87 | 0 | 20 | 170 | 2508746 | 2508596 | Methylobacterium extorquens strain TK 0001, genome assembly, chromosome: TK0001 | blastn | 1791 | 224 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylorubrum | Methylorubrum extorquens | ||
| 2572863 | 2572863 | PRJEB25583_P_NODE_2643_length_251_cov_1.616822_g2466_i0 | PRJEB25583 | 2643 | 251 | 1.616822 | 4.05822322 | Acinetobacter johnsonii | 40214 | Bacteria | Bacteria | 459 | 1.1499999999999996e-124 | NTclustered | gi|1958298831|gb|CP068187.1| | 40214 | g2466 | i0 | 99.602 | 179.243027888446 | 251 | 1 | 100 | 0 | 1 | 251 | 2004190 | 2003940 | Acinetobacter johnsonii strain FDAARGOS_1094 chromosome, complete genome | blastn | 44990 | 459 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter johnsonii | ||
| 3536990 | 3536990 | PRJEB25583_P_NODE_3543_length_215_cov_1.421348_g3366_i0 | PRJEB25583 | 3543 | 215 | 1.421348 | 3.0558982 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 398 | 2.1099999999999997e-106 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g3366 | i0 | 100 | 101 | 215 | 0 | 100 | 0 | 1 | 215 | 3689457 | 3689243 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 21715 | 398 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4814233 | 4814233 | PRJEB25583_P_NODE_1604_length_338_cov_8.903654_g1427_i0 | PRJEB25583 | 1604 | 338 | 8.903654 | 30.09435052 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 619 | 6.969999999999999e-173 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g1427 | i0 | 99.704 | 690.112426035503 | 338 | 1 | 100 | 0 | 1 | 338 | 188540 | 188203 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 233258 | 625 | 0.9904 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 4814291 | 4814291 | PRJEB25583_P_NODE_6904_length_161_cov_1.096774_g6727_i0 | PRJEB25583 | 6904 | 161 | 1.096774 | 1.76580614 | Cupriavidus | 106589 | Bacteria | Bacteria | 126 | 7.77e-25 | NTclustered | gi|1780515536|gb|CP046331.1| | 119219 | g6727 | i0 | 89.796 | 4.93167701863354 | 98 | 10 | 61 | 0 | 64 | 161 | 1793478 | 1793575 | Cupriavidus metallidurans strain FDAARGOS_675 chromosome, complete genome | blastn | 794 | 126 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus metallidurans | ||
| 6089582 | 6089582 | PRJEB25583_P_NODE_905_length_498_cov_16.683297_g733_i0 | PRJEB25583 | 905 | 498 | 16.683297 | 83.08281906 | Roseateles | 93681 | Bacteria | Bacteria | 756 | 0 | NTclustered | gi|1033652334|gb|CP011514.1| | 1658665 | g733 | i0 | 95.218 | 258.708835341365 | 481 | 18 | 96 | 5 | 21 | 498 | 5819191 | 5819669 | Mitsuaria sp. 7, complete genome | blastn | 128837 | 761 | 0.993429697766097 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Mitsuaria sp. 7 | ||
| 6401141 | 6401141 | PRJEB25583_P_NODE_6906_length_161_cov_1.080645_g6729_i0 | PRJEB25583 | 6906 | 161 | 1.080645 | 1.73983845 | Ectopseudomonas chengduensis | 489632 | Bacteria | Bacteria | 276 | 7.29e-70 | NTclustered | gi|2536885667|gb|CP129400.1| | 489632 | g6729 | i0 | 97.516 | 99.1925465838509 | 161 | 4 | 100 | 0 | 1 | 161 | 3151012 | 3150852 | Ectopseudomonas chengduensis strain WD211 chromosome, complete genome | blastn | 15970 | 276 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas chengduensis | ||
| 6401143 | 6401143 | PRJEB25583_P_NODE_7006_length_160_cov_1.260163_g6829_i0 | PRJEB25583 | 7006 | 160 | 1.260163 | 2.0162608 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 274 | 2.5999999999999997e-69 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g6829 | i0 | 97.5 | 3.3 | 160 | 4 | 100 | 0 | 1 | 160 | 1782510 | 1782351 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 528 | 274 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 6401145 | 6401145 | PRJEB25583_P_NODE_7546_length_156_cov_0.974790_g7369_i0 | PRJEB25583 | 7546 | 156 | 0.97479 | 1.5206724 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 283 | 4.1899999999999994e-72 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g7369 | i0 | 99.359 | 99.7564102564103 | 156 | 1 | 100 | 0 | 1 | 156 | 562688 | 562533 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 15562 | 283 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 7364099 | 7364099 | PRJEB25583_P_NODE_1006_length_463_cov_24.260563_g831_i0 | PRJEB25583 | 1006 | 463 | 24.260563 | 112.32640669 | Roseateles | 93681 | Bacteria | Bacteria | 787 | 0 | NTclustered | gi|1033652334|gb|CP011514.1| | 1658665 | g831 | i0 | 99.089 | 246.976241900648 | 439 | 3 | 95 | 1 | 21 | 458 | 5819191 | 5819629 | Mitsuaria sp. 7, complete genome | blastn | 114350 | 787 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Mitsuaria sp. 7 | ||
| 7364136 | 7364136 | PRJEB25583_P_NODE_5246_length_180_cov_0.986014_g5069_i0 | PRJEB25583 | 5246 | 180 | 0.986014 | 1.7748252 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 333 | 4.87e-87 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g5069 | i0 | 100 | 100 | 180 | 0 | 100 | 0 | 1 | 180 | 3224828 | 3225007 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 18000 | 333 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 7675273 | 7675273 | PRJEB25583_P_NODE_6267_length_167_cov_1.184615_g6090_i0 | PRJEB25583 | 6267 | 167 | 1.184615 | 1.97830705 | Ectopseudomonas chengduensis | 489632 | Bacteria | Bacteria | 309 | 7.53e-80 | NTclustered | gi|2536885667|gb|CP129400.1| | 489632 | g6090 | i0 | 100 | 25.9101796407186 | 167 | 0 | 100 | 0 | 1 | 167 | 3761573 | 3761739 | Ectopseudomonas chengduensis strain WD211 chromosome, complete genome | blastn | 4327 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas chengduensis | ||
| 8639523 | 8639523 | PRJEB25583_P_NODE_5247_length_180_cov_0.951049_g5070_i0 | PRJEB25583 | 5247 | 180 | 0.951049 | 1.7118882 | Bacteria | 2 | Bacteria | Bacteria | 226 | 8.5e-55 | NTclustered | gi|2315134744|gb|CP106759.1| | 40324 | g5070 | i0 | 95.714 | 241.555555555556 | 140 | 6 | 78 | 0 | 1 | 140 | 329990 | 330129 | Stenotrophomonas maltophilia strain SG.Y2 chromosome, complete genome | blastn | 43480 | 228 | 0.991228070175439 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 8639536 | 8639536 | PRJEB25583_P_NODE_6447_length_165_cov_1.375000_g6270_i0 | PRJEB25583 | 6447 | 165 | 1.375 | 2.26875 | Escherichia | 561 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g6270 | i0 | 100 | 101 | 165 | 0 | 100 | 0 | 1 | 165 | 4053568 | 4053404 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 16665 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 8639552 | 8639552 | PRJEB25583_P_NODE_7527_length_156_cov_1.243697_g7350_i0 | PRJEB25583 | 7527 | 156 | 1.243697 | 1.94016732 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 207 | 2.59e-49 | NTclustered | gi|2293293099|gb|CP103371.1| | 2970464 | g7350 | i0 | 90.909 | 94.3141025641026 | 154 | 14 | 99 | 0 | 3 | 156 | 635213 | 635366 | Massilia sp. H6 chromosome, complete genome | blastn | 14713 | 207 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia sp. H6 | ||
| 8639559 | 8639559 | PRJEB25583_P_NODE_887_length_504_cov_56.899358_g715_i0 | PRJEB25583 | 887 | 504 | 56.899358 | 286.77276432 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 883 | 0 | NTclustered | gi|2618357005|gb|CP137721.1| | 562 | g715 | i0 | 99.793 | 656.734126984127 | 482 | 0 | 95 | 1 | 3 | 483 | 5149492 | 5149973 | Escherichia coli strain HNTH2207 chromosome | blastn | 330994 | 883 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 9914547 | 9914547 | PRJEB25583_P_NODE_2708_length_247_cov_1.285714_g2531_i0 | PRJEB25583 | 2708 | 247 | 1.285714 | 3.17571358 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 418 | 1.9099999999999998e-112 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g2531 | i0 | 100 | 91.497975708502 | 226 | 0 | 91 | 0 | 22 | 247 | 541073 | 540848 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 22600 | 418 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 9914576 | 9914576 | PRJEB25583_P_NODE_4888_length_185_cov_2.952703_g4711_i0 | PRJEB25583 | 4888 | 185 | 2.952703 | 5.46250055 | Haemophilus | 724 | Bacteria | Bacteria | 337 | 3.89e-88 | NTclustered | gi|1919208202|gb|CP063113.1| | 729 | g4711 | i0 | 99.459 | 555.048648648649 | 185 | 1 | 100 | 0 | 1 | 185 | 408148 | 408332 | Haemophilus parainfluenzae strain M1C147_1 chromosome, complete genome | blastn | 102684 | 337 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus parainfluenzae | ||
| 9914581 | 9914581 | PRJEB25583_P_NODE_5348_length_178_cov_1.879433_g5171_i0 | PRJEB25583 | 5348 | 178 | 1.879433 | 3.34539074 | Neisseria | 482 | Bacteria | Bacteria | 329 | 6.21e-86 | NTclustered | gi|1633799129|gb|CP039886.1| | 484 | g5171 | i0 | 100 | 351.016853932584 | 178 | 0 | 100 | 0 | 1 | 178 | 126953 | 126776 | Neisseria flavescens strain ATCC 13120 chromosome, complete genome | blastn | 62481 | 329 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria flavescens | ||
| 11189757 | 11189757 | PRJEB25583_P_NODE_3349_length_221_cov_1.429348_g3172_i0 | PRJEB25583 | 3349 | 221 | 1.429348 | 3.15885908 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 409 | 1.0100000000000001e-109 | NTclustered | gi|2890464394|gb|CP177216.1| | 562 | g3172 | i0 | 100 | 855.085972850679 | 221 | 0 | 100 | 0 | 1 | 221 | 227323 | 227103 | Escherichia coli strain ECDA0423 chromosome, complete genome | blastn | 188974 | 409 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 11189785 | 11189785 | PRJEB25583_P_NODE_6429_length_165_cov_1.742188_g6252_i0 | PRJEB25583 | 6429 | 165 | 1.742188 | 2.8746102 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g6252 | i0 | 100 | 100 | 165 | 0 | 100 | 0 | 1 | 165 | 4593252 | 4593088 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16500 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12465554 | 12465554 | PRJEB25583_P_NODE_3830_length_207_cov_1.717647_g3653_i0 | PRJEB25583 | 3830 | 207 | 1.717647 | 3.55552929 | Escherichia | 561 | Bacteria | Bacteria | 383 | 5.65e-102 | NTclustered | gi|2577445669|gb|CP115178.1| | 562 | g3653 | i0 | 100 | 83.0048309178744 | 207 | 0 | 100 | 0 | 1 | 207 | 2132749 | 2132955 | Escherichia coli strain B chromosome, complete genome | blastn | 17182 | 383 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13739912 | 13739912 | PRJEB25583_P_NODE_6011_length_170_cov_1.157895_g5834_i0 | PRJEB25583 | 6011 | 170 | 1.157895 | 1.9684215 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 315 | 1.64e-81 | NTclustered | gi|2536885667|gb|CP129400.1| | 489632 | g5834 | i0 | 100 | 93.6058823529412 | 170 | 0 | 100 | 0 | 1 | 170 | 2334648 | 2334817 | Ectopseudomonas chengduensis strain WD211 chromosome, complete genome | blastn | 15913 | 315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas chengduensis | ||
| 13739922 | 13739922 | PRJEB25583_P_NODE_6431_length_165_cov_1.648438_g6254_i0 | PRJEB25583 | 6431 | 165 | 1.648438 | 2.7199227 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g6254 | i0 | 100 | 100 | 165 | 0 | 100 | 0 | 1 | 165 | 768565 | 768729 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 16500 | 305 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 13739931 | 13739931 | PRJEB25583_P_NODE_7011_length_160_cov_1.252033_g6834_i0 | PRJEB25583 | 7011 | 160 | 1.252033 | 2.0032528 | Legionella | 445 | Bacteria | Bacteria | 296 | 5.55e-76 | NTclustered | gi|1073872134|gb|CP015928.1| | 446 | g6834 | i0 | 100 | 271 | 160 | 0 | 100 | 0 | 1 | 160 | 362277 | 362436 | Legionella pneumophila strain Philadelphia_1_CDC, complete genome | blastn | 43360 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Legionella | Legionella pneumophila | ||
| 15014340 | 15014340 | PRJEB25583_P_NODE_5752_length_173_cov_1.139706_g5575_i0 | PRJEB25583 | 5752 | 173 | 1.139706 | 1.97169138 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 320 | 3.61e-83 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g5575 | i0 | 100 | 107.364161849711 | 173 | 0 | 100 | 0 | 1 | 173 | 1813663 | 1813491 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 18574 | 320 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15014350 | 15014350 | PRJEB25583_P_NODE_6472_length_165_cov_1.132812_g6295_i0 | PRJEB25583 | 6472 | 165 | 1.132812 | 1.8691398 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 294 | 2.08e-75 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g6295 | i0 | 98.788 | 193.333333333333 | 165 | 2 | 100 | 0 | 1 | 165 | 788886 | 789050 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 31900 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 15014378 | 15014378 | PRJEB25583_P_NODE_8492_length_150_cov_1.017699_g8315_i0 | PRJEB25583 | 8492 | 150 | 1.017699 | 1.5265485 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 278 | 1.85e-70 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g8315 | i0 | 100 | 100 | 150 | 0 | 100 | 0 | 1 | 150 | 4108121 | 4107972 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 15000 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16289125 | 16289125 | PRJEB25583_P_NODE_4013_length_203_cov_0.927711_g3836_i0 | PRJEB25583 | 4013 | 203 | 0.927711 | 1.88325333 | Bacteria | 2 | Bacteria | Bacteria | 156 | 1.31e-33 | NTclustered | gi|857118485|gb|CP011223.1| | 730 | g3836 | i0 | 80.597 | 5.96059113300493 | 201 | 39 | 99 | 0 | 1 | 201 | 1763299 | 1763499 | [Haemophilus] ducreyi strain 6644 chromosome | blastn | 1210 | 156 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | [Haemophilus] ducreyi | ||
| 16289168 | 16289168 | PRJEB25583_P_NODE_7773_length_154_cov_1.641026_g7596_i0 | PRJEB25583 | 7773 | 154 | 1.641026 | 2.52718004 | Escherichia | 561 | Bacteria | Bacteria | 285 | 1.14e-72 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g7596 | i0 | 100 | 192.331168831169 | 154 | 0 | 100 | 0 | 1 | 154 | 4453977 | 4454130 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 29619 | 285 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17564252 | 17564252 | PRJEB25583_P_NODE_1994_length_297_cov_1.565385_g1817_i0 | PRJEB25583 | 1994 | 297 | 1.565385 | 4.64919345 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 549 | 8.029999999999997e-152 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g1817 | i0 | 100 | 169.69696969697 | 297 | 0 | 100 | 0 | 1 | 297 | 227176 | 226880 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 50400 | 549 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18838255 | 18838255 | PRJEB25583_P_NODE_4795_length_187_cov_1.706667_g4618_i0 | PRJEB25583 | 4795 | 187 | 1.706667 | 3.19146729 | Aeromonas | 642 | Bacteria | Bacteria | 346 | 6.56e-91 | NTclustered | gi|2209819103|gb|CP093309.1| | 644 | g4618 | i0 | 100 | 941.96256684492 | 187 | 0 | 100 | 0 | 1 | 187 | 298735 | 298549 | Aeromonas hydrophila strain AC133 chromosome, complete genome | blastn | 176147 | 346 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas hydrophila | ||
| 19148496 | 19148496 | PRJEB25583_P_NODE_916_length_493_cov_9.936404_g744_i0 | PRJEB25583 | 916 | 493 | 9.936404 | 48.98647172 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 785 | 0 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g744 | i0 | 96.632 | 428.257606490872 | 475 | 12 | 96 | 4 | 21 | 493 | 1283465 | 1282993 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 211131 | 785 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 20112987 | 20112987 | PRJEB25583_P_NODE_6096_length_169_cov_1.106061_g5919_i0 | PRJEB25583 | 6096 | 169 | 1.106061 | 1.86924309 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g5919 | i0 | 100 | 100 | 169 | 0 | 100 | 0 | 1 | 169 | 3672423 | 3672591 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 16900 | 313 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20112994 | 20112994 | PRJEB25583_P_NODE_6656_length_163_cov_1.301587_g6479_i0 | PRJEB25583 | 6656 | 163 | 1.301587 | 2.12158681 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g6479 | i0 | 100 | 100 | 163 | 0 | 100 | 0 | 1 | 163 | 678160 | 677998 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16300 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 20113004 | 20113004 | PRJEB25583_P_NODE_7416_length_157_cov_1.133333_g7239_i0 | PRJEB25583 | 7416 | 157 | 1.133333 | 1.77933281 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 291 | 2.52e-74 | NTclustered | gi|1384513437|gb|CP029148.1| | 287 | g7239 | i0 | 100 | 100 | 157 | 0 | 100 | 0 | 1 | 157 | 2437400 | 2437556 | Pseudomonas aeruginosa strain AR_0440 chromosome | blastn | 15700 | 291 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 21388507 | 21388507 | PRJEB25583_P_NODE_1857_length_309_cov_6.191176_g1680_i0 | PRJEB25583 | 1857 | 309 | 6.191176 | 19.13073384 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 532 | 8.45e-147 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g1680 | i0 | 100 | 93.2038834951456 | 288 | 0 | 93 | 0 | 1 | 288 | 1033727 | 1033440 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 28800 | 532 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21388533 | 21388533 | PRJEB25583_P_NODE_4097_length_201_cov_1.420732_g3920_i0 | PRJEB25583 | 4097 | 201 | 1.420732 | 2.85567132 | Escherichia | 561 | Bacteria | Bacteria | 372 | 1.18e-98 | NTclustered | gi|2577445669|gb|CP115178.1| | 562 | g3920 | i0 | 100 | 95.9950248756219 | 201 | 0 | 100 | 0 | 1 | 201 | 2132665 | 2132465 | Escherichia coli strain B chromosome, complete genome | blastn | 19295 | 372 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21388585 | 21388585 | PRJEB25583_P_NODE_8237_length_151_cov_1.526316_g8060_i0 | PRJEB25583 | 8237 | 151 | 1.526316 | 2.30473716 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 279 | 5.19e-71 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g8060 | i0 | 100 | 100 | 151 | 0 | 100 | 0 | 1 | 151 | 1523303 | 1523153 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 15100 | 279 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21699694 | 21699694 | PRJEB25583_P_NODE_1918_length_304_cov_2.000000_g1741_i0 | PRJEB25583 | 1918 | 304 | 2 | 6.08 | Roseateles amylovorans | 2978473 | Bacteria | Bacteria | 501 | 2.34e-137 | NTclustered | gi|2327629256|gb|CP104562.2| | 2978473 | g1741 | i0 | 96.393 | 384.608552631579 | 305 | 9 | 100 | 2 | 1 | 304 | 1744443 | 1744746 | Roseateles amylovorans strain BIM B-1768 chromosome, complete genome | blastn | 116921 | 501 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles amylovorans | ||
| 22663352 | 22663352 | PRJEB25583_P_NODE_1678_length_330_cov_2.088737_g1501_i0 | PRJEB25583 | 1678 | 330 | 2.088737 | 6.8928321 | Acinetobacter | 469 | Bacteria | Bacteria | 593 | 4.119999999999999e-165 | NTclustered | gi|1751391443|gb|CP019143.2| | 28090 | g1501 | i0 | 99.091 | 646.733333333333 | 330 | 3 | 100 | 0 | 1 | 330 | 28301 | 28630 | Acinetobacter lwoffii strain ZS207 chromosome, complete genome | blastn | 213422 | 593 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lwoffii | ||
| 22663393 | 22663393 | PRJEB25583_P_NODE_5298_length_179_cov_1.232394_g5121_i0 | PRJEB25583 | 5298 | 179 | 1.232394 | 2.20598526 | Escherichia | 561 | Bacteria | Bacteria | 331 | 1.74e-86 | NTclustered | gi|2507144281|gb|CP122454.1| | 562 | g5121 | i0 | 100 | 100 | 179 | 0 | 100 | 0 | 1 | 179 | 2362920 | 2363098 | Escherichia coli strain 82.0311 chromosome, complete genome | blastn | 17900 | 331 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 22663416 | 22663416 | PRJEB25583_P_NODE_7118_length_159_cov_1.270492_g6941_i0 | PRJEB25583 | 7118 | 159 | 1.270492 | 2.02008228 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 224 | 2.64e-54 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g6941 | i0 | 98.438 | 338.88050314465403 | 128 | 1 | 100 | 1 | 30 | 156 | 1497104 | 1497231 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 53882 | 226 | 0.991150442477876 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 22974952 | 22974952 | PRJEB25583_P_NODE_2419_length_264_cov_1.185022_g2242_i0 | PRJEB25583 | 2419 | 264 | 1.185022 | 3.12845808 | Undibacterium sp. YM2 | 2058625 | Bacteria | Bacteria | 250 | 7.97e-62 | NTclustered | gi|1798099803|dbj|AP018441.1| | 2058625 | g2242 | i0 | 83.774 | 9.74621212121212 | 265 | 41 | 100 | 2 | 1 | 264 | 448974 | 448711 | Undibacterium sp. YM2 DNA, complete genome | blastn | 2573 | 250 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium sp. YM2 | ||
| 22974954 | 22974954 | PRJEB25583_P_NODE_2539_length_256_cov_3.493151_g2362_i0 | PRJEB25583 | 2539 | 256 | 3.493151 | 8.94246656 | [Haemophilus] ducreyi | 730 | Bacteria | Bacteria | 429 | 9.2e-116 | NTclustered | gi|857120193|gb|CP011224.1| | 730 | g2362 | i0 | 96.899 | 355.4765625 | 258 | 5 | 100 | 3 | 1 | 256 | 1680640 | 1680384 | [Haemophilus] ducreyi strain HD183 chromosome | blastn | 91002 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | [Haemophilus] ducreyi | ||
| 23938766 | 23938766 | PRJEB25583_P_NODE_3999_length_203_cov_1.500000_g3822_i0 | PRJEB25583 | 3999 | 203 | 1.5 | 3.045 | root | 1 | Root_unresolved | Root_unresolved | 359 | 9.31e-95 | NTclustered | gi|2577445669|gb|CP115178.1| | 562 | g3822 | i0 | 98.522 | 141.990147783251 | 203 | 3 | 100 | 0 | 1 | 203 | 900946 | 901148 | Escherichia coli strain B chromosome, complete genome | blastn | 28824 | 359 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 23938773 | 23938773 | PRJEB25583_P_NODE_4579_length_191_cov_1.941558_g4402_i0 | PRJEB25583 | 4579 | 191 | 1.941558 | 3.70837578 | Escherichia | 561 | Bacteria | Bacteria | 322 | 1.13e-83 | NTclustered | gi|2703029942|gb|CP148416.1| | 562 | g4402 | i0 | 100 | 91.2356020942408 | 174 | 0 | 91 | 0 | 18 | 191 | 1255645 | 1255818 | Escherichia coli strain Z1323CEC0016 chromosome, complete genome | blastn | 17426 | 322 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 23938819 | 23938819 | PRJEB25583_P_NODE_8499_length_150_cov_0.929204_g8322_i0 | PRJEB25583 | 8499 | 150 | 0.929204 | 1.393806 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 278 | 1.85e-70 | NTclustered | gi|2294768425|gb|CP103666.1| | 548 | g8322 | i0 | 100 | 16 | 150 | 0 | 100 | 0 | 1 | 150 | 251814 | 251665 | Klebsiella aerogenes strain 4417 plasmid pMB5632_2, complete sequence | blastn | 2400 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella aerogenes | ||
| 24248806 | 24248806 | PRJEB25583_P_NODE_2420_length_263_cov_23.805310_g2243_i0 | PRJEB25583 | 2420 | 263 | 23.80531 | 62.6079653 | Vibrio algicola | 2662262 | Bacteria | Bacteria | 481 | 2.58e-131 | NTclustered | gi|1772817214|gb|CP045699.1| | 2662262 | g2243 | i0 | 99.62 | 890.049429657795 | 263 | 1 | 100 | 0 | 1 | 263 | 57535 | 57797 | Vibrio algicola strain SM1977 chromosome 1, complete sequence | blastn | 234083 | 481 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio algicola | ||
| 24248825 | 24248825 | PRJEB25583_P_NODE_5060_length_183_cov_1.041096_g4883_i0 | PRJEB25583 | 5060 | 183 | 1.041096 | 1.90520568 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 339 | 1.07e-88 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g4883 | i0 | 100 | 92.5573770491803 | 183 | 0 | 100 | 0 | 1 | 183 | 2164881 | 2164699 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 16938 | 339 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 24248848 | 24248848 | PRJEB25583_P_NODE_960_length_478_cov_33.195011_g787_i0 | PRJEB25583 | 960 | 478 | 33.195011 | 158.67215258 | Acinetobacter lanii | 2715163 | Bacteria | Bacteria | 773 | 0 | NTclustered | gi|1822446246|gb|CP049916.1| | 2715163 | g787 | i0 | 96.957 | 667.995815899582 | 460 | 14 | 96 | 0 | 19 | 478 | 26863 | 27322 | Acinetobacter lanii strain 185 chromosome, complete genome | blastn | 319302 | 773 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter lanii | ||
| 25212556 | 25212556 | PRJEB25583_P_NODE_6060_length_169_cov_1.734848_g5883_i0 | PRJEB25583 | 6060 | 169 | 1.734848 | 2.93189312 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g5883 | i0 | 100 | 100 | 169 | 0 | 100 | 0 | 1 | 169 | 1310662 | 1310494 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 16900 | 313 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;