RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB25583" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJEB25583 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2572855 2572855 PRJEB25583_P_NODE_1643_length_333_cov_11.557432_g1466_i0 PRJEB25583 1643 333 11.557432 38.48624856 Luteoviridae sp. 1955165 Viruses Viruses 281 3.68e-71   NTclustered gi|2836327433|gb|PQ161556.1| 1955165 g1466 i0 82.857 7.04204204204204 315 52 94 2 20 333 1301 1614 MAG: Luteoviridae sp. isolate CS06 RNA-dependent RNA polymerase, coat protein VP1, and capsid protein genes, complete cds blastn 2345 281 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Luteoviridae sp.
2572874 2572874 PRJEB25583_P_NODE_4383_length_195_cov_1.740506_g4206_i0 PRJEB25583 4383 195 1.740506 3.3939867 Tolivirales sp. gcode 6 3108923 Viruses Viruses 285 1.5300000000000001e-72   NTclustered gi|2647550025|gb|OR843800.1| 3108923 g4206 i0 97.041 0.866666666666667 169 5 87 0 13 181 1414 1246 Tolivirales sp. gcode 6 strain MR233-17E/7345 hypothetical protein gene, partial cds; RNA-dependent RNA polymerase gene, complete cds; and structural protein gene, partial cds blastn 169 285 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp. gcode 6
14051128 14051128 PRJEB25583_P_NODE_4952_length_184_cov_3.238095_g4775_i0 PRJEB25583 4952 184 3.238095 5.9580948 Tolivirales sp. gcode 6 3108923 Viruses Viruses 261 2.39e-65   NTclustered gi|2647550025|gb|OR843800.1| 3108923 g4775 i0 94.706 0.923913043478261 170 6 91 1 18 184 1765 1934 Tolivirales sp. gcode 6 strain MR233-17E/7345 hypothetical protein gene, partial cds; RNA-dependent RNA polymerase gene, complete cds; and structural protein gene, partial cds blastn 170 261 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp. gcode 6
17874607 17874607 PRJEB25583_P_NODE_6515_length_164_cov_1.858268_g6338_i0 PRJEB25583 6515 164 1.858268 3.04755952 Lolavirus latenslolii 3430466 Viruses Viruses 213 5.94e-51   NTclustered gi|169803200|ref|NC_010434.1| 365150 g6338 i0 93.662 1.73170731707317 142 9 87 0 3 144 7642 7501 Lolium latent virus, complete genome blastn 284 213 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Lolavirus Lolavirus latenslolii
24248812 24248812 PRJEB25583_P_NODE_3020_length_233_cov_5.505102_g2843_i0 PRJEB25583 3020 233 5.505102 12.82688766 Luteoviridae sp. 1955165 Viruses Viruses 213 9.04e-51   NTclustered gi|2171145475|gb|MZ218407.1| 1955165 g2843 i0 84.834 2.05579399141631 211 32 91 0 21 231 3446 3656 MAG: Luteoviridae sp. isolate s48-k141_1520260 genomic sequence blastn 479 213 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Luteoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;