RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJEB25583" and tax_phylum = "Cressdnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB25583 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16599786 16599786 PRJEB25583_P_NODE_1514_length_351_cov_8.101911_g1337_i0 PRJEB25583 1514 351 8.101911 28.43770761 Cynopterus sphinx circular DNA virus 10 3064083 Viruses Viruses 165 4.08e-36   NTclustered gi|2593361801|gb|OQ351951.1| 3064083 g1337 i0 96.939 0.279202279202279 98 3 28 0 29 126 2186 2283 MAG: Cynopterus sphinx circular DNA virus 10 isolate B468G10 genomic sequence blastn 98 165 1 Viruses   Shotokuvirae Cressdnaviricota         Cynopterus sphinx circular DNA virus 10
17874590 17874590 PRJEB25583_P_NODE_3855_length_206_cov_3.106509_g3678_i0 PRJEB25583 3855 206 3.106509 6.39940854 Cirlivirales sp. 2809008 Viruses Viruses 63.9 8.32e-6   NTclustered gi|2906154851|gb|PQ646830.1| 2809008 g3678 i0 100 0.543689320388349 34 0 17 0 140 173 2570 2537 MAG: Cirlivirales sp. isolate k127_3981985 genomic sequence blastn 112 63.9 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales     Cirlivirales sp.
24248828 24248828 PRJEB25583_P_NODE_5320_length_178_cov_6.226950_g5143_i0 PRJEB25583 5320 178 6.22695 11.083971 Cressdnaviricota sp. 2748378 Viruses Viruses 97.1 6.86e-16   NTclustered gi|1896094868|gb|MT671994.1| 2748378 g5143 i0 93.75 0.359550561797753 64 4 36 0 51 114 114 177 Cressdnaviricota sp. isolate 77F, complete genome blastn 64 97.1 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;