RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJEB25583" and tax_kingdom = "Metazoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Metazoa · 28 ✖

tax_clade 1

bioproject 1

  • PRJEB25583 · 28 ✖

analysis 1

  • blastn · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5125406 5125406 PRJEB25583_P_NODE_5985_length_170_cov_1.451128_g5808_i0 PRJEB25583 5985 170 1.451128 2.4669176 Artemia franciscana 6661 Arthropoda Arthropoda 292 7.69e-75   NTclustered gi|2743025003|ref|XR_010621486.1| 6661 g5808 i0 97.647 24.6882352941176 170 4 100 0 1 170 576 745 PREDICTED: Artemia franciscana nitric oxide synthase 1-like (LOC136042911), transcript variant X2, misc_RNA blastn 4197 292 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
5125409 5125409 PRJEB25583_P_NODE_6465_length_165_cov_1.187500_g6288_i0 PRJEB25583 6465 165 1.1875 1.959375 Leptochiton asellus 211853 Mollusca Mollusca 111 2.24e-20   NTclustered gi|34369208|gb|AY145414.1| 211853 g6288 i0 89.011 5.33939393939394 91 8 55 2 22 112 2595 2683 Leptochiton asellus 28S ribosomal RNA gene, partial sequence blastn 881 111 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Lepidopleurida Lepidopleuridae Leptochiton Leptochiton asellus
6089518 6089518 PRJEB25583_P_NODE_4025_length_202_cov_2.739394_g3848_i0 PRJEB25583 4025 202 2.739394 5.53357588 Artemia 6660 Arthropoda Arthropoda 374 3.3e-99   NTclustered gi|2295022767|gb|OP365120.1| 6661 g3848 i0 100 100.237623762376 202 0 100 0 1 202 210 9 Artemia franciscana isolate soni103 small subunit ribosomal RNA gene, partial sequence blastn 20248 374 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
6401135 6401135 PRJEB25583_P_NODE_5986_length_170_cov_1.443609_g5809_i0 PRJEB25583 5986 170 1.443609 2.4541353 Penaeus chinensis 139456 Arthropoda Arthropoda 62.1 2.36e-5   NTclustered gi|2220187893|ref|XM_047618202.1| 139456 g5809 i0 100 15.4764705882353 33 0 19 0 27 59 1000 1032 PREDICTED: Penaeus chinensis probable serine/threonine-protein kinase clkA (LOC125028722), partial mRNA blastn 2631 62.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Penaeidae Penaeus Penaeus chinensis
6401149 6401149 PRJEB25583_P_NODE_8306_length_151_cov_1.026316_g8129_i0 PRJEB25583 8306 151 1.026316 1.54973716 Panthera onca 9690 Chordata Chordata 154 3.28e-33   NTclustered gi|2614064246|ref|XM_060611915.1| 9690 g8129 i0 97.753 164.94701986755 89 2 59 0 63 151 9626 9714 PREDICTED: Panthera onca BTB domain containing 3 (BTBD3), transcript variant X1, mRNA blastn 24907 154 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Panthera Panthera onca
7675255 7675255 PRJEB25583_P_NODE_3867_length_206_cov_1.810651_g3690_i0 PRJEB25583 3867 206 1.810651 3.72994106 Cotesia chilonis 89804 Arthropoda Arthropoda 145 2.89e-30   NTclustered gi|2129410486|gb|MW299760.1| 89804 g3690 i0 81.977 15.2038834951456 172 29 83 2 27 197 60 230 Cotesia chilonis egg surface protein ES-54 mRNA, partial cds blastn 3132 145 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Braconidae Cotesia Cotesia chilonis
7675265 7675265 PRJEB25583_P_NODE_4967_length_184_cov_1.693878_g4790_i0 PRJEB25583 4967 184 1.693878 3.11673552 Cricotopus sp. 2 SRM-2010 891489 Arthropoda Arthropoda 291 3.05e-74   NTclustered gi|346681867|gb|HQ440581.1| 891489 g4790 i0 95.109 81.6141304347826 184 9 100 0 1 184 402 585 Cricotopus sp. 2 SRM-2010 voucher CAM04 18S ribosomal RNA gene, partial sequence blastn 15017 291 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Cricotopus Cricotopus sp. 2 SRM-2010
8639495 8639495 PRJEB25583_P_NODE_2667_length_249_cov_6.075472_g2490_i0 PRJEB25583 2667 249 6.075472 15.12792528 Ploima 84394 Rotifera other_Eukaryota 233 7.5e-57   NTclustered gi|1859640894|gb|MN970216.1| 360698 g2490 i0 86.301 9.56224899598394 219 25 87 4 20 235 12300 12516 Proales similis mitochondrion, complete genome blastn 2381 233 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
8949999 8949999 PRJEB25583_P_NODE_5248_length_179_cov_60.204225_g5071_i0 PRJEB25583 5248 179 60.204225 107.76556275 Lumbriculus sp. EZ-2019 2480966 Annelida Annelida 281 1.78e-71   NTclustered gi|1494622620|gb|MK076419.1| 2480966 g5071 i0 97.561 75.731843575419 164 4 92 0 13 176 3283 3446 Lumbriculus sp. EZ-2019 isolate ANN_LUMva large subunit ribosomal RNA gene, partial sequence blastn 13556 281 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus sp. EZ-2019
9914557 9914557 PRJEB25583_P_NODE_3288_length_223_cov_2.553763_g3111_i0 PRJEB25583 3288 223 2.553763 5.69489149 Chironomidae 7149 Arthropoda Arthropoda 387 4.779999999999998e-103   NTclustered gi|38422425|emb|AJ586562.1| 59808 g3111 i0 98.624 96.7892376681614 218 3 98 0 1 218 2169 1952 Acricotopus lucens partial 28S rRNA gene, clone AlSo28S-42 blastn 21584 387 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Acricotopus Acricotopus lucens
9914567 9914567 PRJEB25583_P_NODE_4088_length_201_cov_1.847561_g3911_i0 PRJEB25583 4088 201 1.847561 3.71359761 Aphididae 27482 Arthropoda Arthropoda 327 2.59e-85   NTclustered gi|2620630428|ref|XR_009661998.1| 40932 g3911 i0 97.906 91.6517412935323 191 0 93 1 15 201 3965 3775 PREDICTED: Rhopalosiphum padi large subunit ribosomal RNA (LOC132928126), rRNA blastn 18422 327 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Rhopalosiphum Rhopalosiphum padi
9914588 9914588 PRJEB25583_P_NODE_6108_length_168_cov_5.145038_g5931_i0 PRJEB25583 6108 168 5.1450379999999996 8.64366384 Brachytrupes 208857 Arthropoda Arthropoda 104 3.84e-18   NTclustered gi|27463971|gb|AF514547.1| 208856 g5931 i0 95.385 35.5952380952381 65 3 39 0 87 151 653 589 Brachytrupes membranaceus 18S ribosomal RNA gene, partial sequence blastn 5980 104 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Orthoptera Gryllidae Brachytrupes Brachytrupes membranaceus
12776574 12776574 PRJEB25583_P_NODE_5351_length_178_cov_1.680851_g5174_i0 PRJEB25583 5351 178 1.680851 2.99191478 Mus musculus 10090 Chordata Chordata 279 6.35e-71   NTclustered gi|2904935163|gb|PQ738086.1| 10090 g5174 i0 94.972 70.7078651685393 179 8 100 1 1 178 633 811 Mus musculus lncRNA, complete sequence blastn 12586 279 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
14051120 14051120 PRJEB25583_P_NODE_4312_length_196_cov_4.471698_g4135_i0 PRJEB25583 4312 196 4.471698 8.76452808 Testechiniscus spitsbergensis 1028634 Tardigrada other_Eukaryota 113 7.670000000000001e-21   NTclustered gi|1386751360|gb|MH286186.1| 1028634 g4135 i0 91.463 18.9642857142857 82 7 42 0 44 125 70 151 Testechiniscus spitsbergensis strain Tes.spi_NO.004.04 large subunit ribosomal RNA gene, partial sequence blastn 3717 113 1 Eukaryota Opisthokonta Metazoa Tardigrada Heterotardigrada Echiniscoidea Echiniscidae Testechiniscus Testechiniscus spitsbergensis
15325137 15325137 PRJEB25583_P_NODE_2913_length_237_cov_8.395000_g2736_i0 PRJEB25583 2913 237 8.395 19.89615 Eukoenenia mirabilis 1539568 Arthropoda Arthropoda 102 2.08e-17   NTclustered gi|746815351|gb|KF823854.1| 1539568 g2736 i0 95.385 27.746835443038 65 2 27 1 21 85 5 68 Eukoenenia mirabilis voucher MCZ:IZ-127901 28S ribosomal RNA gene, partial sequence blastn 6576 102 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Palpigradi Eukoeneniidae Eukoenenia Eukoenenia mirabilis
16289147 16289147 PRJEB25583_P_NODE_5753_length_173_cov_1.139706_g5576_i0 PRJEB25583 5753 173 1.139706 1.97169138 Phasianidae 9005 Chordata Chordata 285 1.32e-72   NTclustered gi|2919603018|emb|OZ238772.1| 9079 g5576 i0 97.059 1.98265895953757 170 4 98 1 4 173 13270521 13270353 Alectoris rufa genome assembly, chromosome: 7 blastn 343 285 1 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Alectoris Alectoris rufa
16599782 16599782 PRJEB25583_P_NODE_1174_length_418_cov_3.010499_g998_i0 PRJEB25583 1174 418 3.010499 12.58388582 Timema monikensis 170555 Arthropoda Arthropoda 58.4 8.65e-4   NTclustered gi|1946411097|emb|OB793204.1| 170555 g998 i0 97.059 0.215311004784689 34 1 8 0 99 132 168510 168543 3_Tms_b3v08 blastn 90 58.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema monikensis
17564256 17564256 PRJEB25583_P_NODE_2314_length_270_cov_4.334764_g2137_i0 PRJEB25583 2314 270 4.334764 11.7038628 Isotomidae 36141 Arthropoda Arthropoda 102 2.42e-17   NTclustered gi|388565132|gb|JN981050.1| 281420 g2137 i0 89.873 1.86296296296296 79 8 29 0 185 263 2113 2191 Folsomia quadrioculata voucher Potapov 0904 28S ribosomal RNA gene, partial sequence blastn 503 102 1 Eukaryota Opisthokonta Metazoa Arthropoda Collembola Entomobryomorpha Isotomidae Folsomia Folsomia quadrioculata
17874575 17874575 PRJEB25583_P_NODE_1995_length_297_cov_1.565385_g1818_i0 PRJEB25583 1995 297 1.565385 4.64919345 Sus scrofa 9823 Chordata Chordata 279 1.16e-70   NTclustered gi|225543075|emb|CU468696.15| 9823 g1818 i0 88.066 143.946127946128 243 19 79 5 64 297 8855 9096 Pig DNA sequence from clone CH242-204N7 on chromosome X, complete sequence blastn 42752 279 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
17874583 17874583 PRJEB25583_P_NODE_2935_length_237_cov_1.520000_g2758_i0 PRJEB25583 2935 237 1.52 3.6024 Sipha flava 143950 Arthropoda Arthropoda 246 9.09e-61   NTclustered gi|1418918320|ref|XM_025560906.1| 143950 g2758 i0 85.532 1.9789029535865 235 34 99 0 1 235 385 151 PREDICTED: Sipha flava uncharacterized LOC112687919 (LOC112687919), mRNA blastn 469 246 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Sipha Sipha flava
17874606 17874606 PRJEB25583_P_NODE_6115_length_168_cov_2.801527_g5938_i0 PRJEB25583 6115 168 2.801527 4.70656536 Mus musculus 10090 Chordata Chordata 89.8 1.08e-13   NTclustered gi|2904935057|gb|PQ737980.1| 10090 g5938 i0 87.342 17.6071428571429 79 9 47 1 90 168 384 307 Mus musculus lncRNA390 lncRNA, complete sequence blastn 2958 89.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
18838234 18838234 PRJEB25583_P_NODE_2955_length_236_cov_2.030151_g2778_i0 PRJEB25583 2955 236 2.030151 4.79115636 Artemia 6660 Arthropoda Arthropoda 414 2.34e-111   NTclustered gi|2743080997|ref|XR_010618360.1| 6661 g2778 i0 98.305 38.0508474576271 236 4 100 0 1 236 100 335 PREDICTED: Artemia franciscana large subunit ribosomal RNA (LOC136030742), rRNA blastn 8980 414 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
19148486 19148486 PRJEB25583_P_NODE_6956_length_160_cov_1.951220_g6779_i0 PRJEB25583 6956 160 1.95122 3.121952 Lipaphis pseudobrassicae 511022 Arthropoda Arthropoda 289 9.29e-74   NTclustered gi|2459370135|ref|NC_072150.1| 511022 g6779 i0 99.371 100.3875 159 1 99 0 2 160 14800 14642 Lipaphis pseudobrassicae mitochondrion, complete genome blastn 16062 289 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Lipaphis Lipaphis pseudobrassicae
20423697 20423697 PRJEB25583_P_NODE_4937_length_185_cov_1.040541_g4760_i0 PRJEB25583 4937 185 1.040541 1.92500085 Lytechinus pictus 7653 Echinodermata other_Eukaryota 143 9.11e-30   NTclustered gi|2707457153|ref|XM_054897077.2| 7653 g4760 i0 83.544 31.5189189189189 158 20 84 6 1 155 1882 1728 PREDICTED: Lytechinus pictus tubulin alpha chain-like (LOC129258838), transcript variant X2, mRNA blastn 5831 143 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
22663419 22663419 PRJEB25583_P_NODE_7298_length_158_cov_0.925620_g7121_i0 PRJEB25583 7298 158 0.92562 1.4624796 Opisthokonta 33154 Chordata Chordata 292 7.07e-75   NTclustered gi|74203961|dbj|AK149617.1| 10090 g7121 i0 100 2 158 0 100 0 1 158 1408 1565 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530002K15 product:unclassifiable, full insert sequence blastn 316 292 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
22974980 22974980 PRJEB25583_P_NODE_7219_length_158_cov_1.760331_g7042_i0 PRJEB25583 7219 158 1.760331 2.78132298 Sus scrofa 9823 Chordata Chordata 87.9 3.58e-13   NTclustered gi|299507935|emb|CU928840.6| 9823 g7042 i0 85.542 1.36708860759494 83 12 53 0 59 141 10831 10749 Pig DNA sequence from clone CH242-486G13 on chromosome X, complete sequence blastn 216 87.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
24248821 24248821 PRJEB25583_P_NODE_4760_length_188_cov_1.390728_g4583_i0 PRJEB25583 4760 188 1.390728 2.61456864 Sus scrofa 9823 Chordata Chordata 126 9.36e-25   NTclustered gi|294988734|gb|GU983681.1| 9823 g4583 i0 80.814 1.82978723404255 172 23 90 3 1 169 1646 1810 Sus scrofa mucin 4 transcript variant 4 (MUC4) gene, complete cds, alternatively spliced blastn 344 126 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
25212553 25212553 PRJEB25583_P_NODE_5740_length_173_cov_1.411765_g5563_i0 PRJEB25583 5740 173 1.411765 2.44235345 root 1 Root_unresolved Root_unresolved 56.5 0.001   NTclustered gi|2911451938|emb|OZ223580.1| 8472 g5563 i0 100 129.277456647399 30 0 17 0 101 130 23254435 23254464 Lepidochelys kempii isolate rLepKem1 genome assembly, chromosome: 22 blastn 22365 56.5 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Cheloniidae Lepidochelys Lepidochelys kempii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;