RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJEB2368" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 5 ✖

bioproject 1

  • PRJEB2368 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3849161 3849161 PRJEB2368_P_NODE_9824_length_287_cov_1.352000_g9506_i0 PRJEB2368 9824 287 1.352 3.88024 Caudoviricetes sp. 2832643 Viruses Viruses 141 5.510000000000001e-29   NTclustered gi|2054700439|tpg|BK052999.1| 2832643 g9506 i0 100 2.64808362369338 76 0 53 0 1 76 35552 35627 MAG TPA_asm: Caudoviricetes sp. isolate ctBfo4, partial genome blastn 760 141 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
15325107 15325107 PRJEB2368_P_NODE_9753_length_287_cov_1.364000_g9435_i0 PRJEB2368 9753 287 1.364 3.91468 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 4.41e-5   NTclustered gi|2054634940|tpg|BK051700.1| 2832643 g9435 i0 100 0.24390243902439 33 0 11 0 1 33 9041 9073 MAG TPA_asm: Caudoviricetes sp. isolate ctYFB1, partial genome blastn 70 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17564232 17564232 PRJEB2368_P_NODE_8714_length_287_cov_1.536000_g8396_i0 PRJEB2368 8714 287 1.536 4.40832 Rockefellervirus 2843445 Viruses Viruses 141 5.510000000000001e-29   NTclustered gi|1867214549|gb|MT596498.1| 2750284 g8396 i0 100 18.6341463414634 76 0 53 0 212 287 20293 20368 Staphylococcus virus BESEP1, complete genome blastn 5348 141 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Rockefellervirus Staphylococcus phage vB_SepS_BE01
20423648 20423648 PRJEB2368_P_NODE_9057_length_287_cov_1.472000_g8739_i0 PRJEB2368 9057 287 1.472 4.22464 Caudoviricetes sp. 2832643 Viruses Viruses 141 5.510000000000001e-29   NTclustered gi|2054418231|tpg|BK035686.1| 2832643 g8739 i0 100 1.05574912891986 76 0 53 0 212 287 15470 15545 MAG TPA_asm: Caudoviricetes sp. isolate ctRt68, partial genome blastn 303 141 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21699658 21699658 PRJEB2368_P_NODE_8718_length_287_cov_1.536000_g8400_i0 PRJEB2368 8718 287 1.536 4.40832 Caudoviricetes sp. 2832643 Viruses Viruses 102 2.6e-17   NTclustered gi|2914981140|gb|OR222104.1| 2832643 g8400 i0 93.056 0.250871080139373 72 2 24 1 8 76 58336 58265 MAG: Caudoviricetes sp. isolate MSP0003 genomic sequence blastn 72 102 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;