RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB2368" and tax_kingdom = "Fungi"

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tax_superkingdom 1

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJEB2368 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22891 22891 PRJEB2368_P_NODE_14781_length_160_cov_2.894309_g14462_i0 PRJEB2368 14781 160 2.894309 4.6308944 Candida parapsilosis 5480 Fungi Fungi 296 5.55e-76   NTclustered gi|371925444|gb|JQ062882.1| 5480 g14462 i0 100 51.1125 160 0 100 0 1 160 22416 22575 Candida parapsilosis strain CBS 1954 mitochondrion, partial genome blastn 8178 296 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida parapsilosis
986337 986337 PRJEB2368_P_NODE_4061_length_392_cov_2.109859_g3749_i0 PRJEB2368 4061 392 2.109859 8.27064728 Microsporidium 144516 Fungi Fungi 436 8.859999999999998e-118   NTclustered gi|1031418200|gb|KU302783.1| 1850262 g3749 i0 85.888 83.3341836734694 411 36 99 15 3 392 566 157 Microsporidia sp. A1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 32667 436 1 Eukaryota Opisthokonta Fungi Microsporidia         Microsporidia sp. A1
1297113 1297113 PRJEB2368_P_NODE_422_length_1274_cov_5.903800_g272_i1 PRJEB2368 422 1274 5.9038 75.214412 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 503 2.99e-137   NTclustered gi|2522768008|gb|OR162445.1| 646526 g272 i1 85.773 30.7103610675039 485 57 89 11 187 665 2533 3011 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 39125 503 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
5125347 5125347 PRJEB2368_P_NODE_9265_length_287_cov_1.436000_g8947_i0 PRJEB2368 9265 287 1.436 4.12132 Malassezia globosa 76773 Fungi Fungi 141 5.510000000000001e-29   NTclustered gi|1805972860|gb|CP046440.1| 76773 g8947 i0 100 4.79442508710801 76 0 53 0 212 287 3859 3784 Malassezia globosa strain CBS7966 mitochondrion, complete genome blastn 1376 141 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
6089477 6089477 PRJEB2368_P_NODE_9745_length_287_cov_1.364000_g9427_i0 PRJEB2368 9745 287 1.364 3.91468 Ramalina 56479 Fungi Fungi 52.8 0.027   NTclustered gi|1069417254|gb|KU496963.1| 86786 g9427 i0 100 0.195121951219512 28 0 10 0 20 47 463 490 Ramalina americana voucher TL022-D04 12S ribosomal RNA gene, partial sequence; mitochondrial blastn 56 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Lecanorales Ramalinaceae Ramalina Ramalina americana
12776486 12776486 PRJEB2368_P_NODE_3051_length_473_cov_2.048165_g2751_i0 PRJEB2368 3051 473 2.048165 9.68782045 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 339 3.1499999999999997e-88   NTclustered gi|2522768008|gb|OR162445.1| 646526 g2751 i0 82.836 18.3298097251586 402 46 81 12 86 467 1848 2246 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8670 339 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
15014250 15014250 PRJEB2368_P_NODE_552_length_1142_cov_3.085973_g419_i0 PRJEB2368 552 1142 3.085973 35.24181166 Ecytonucleospora 3078583 Fungi Fungi 1003 0   NTclustered gi|2523179590|gb|OR168077.1| 646526 g419 i0 91.565 71.8809106830123 735 50 83 10 169 895 248 978 Enterocytozoon hepatopenaei strain SHFX4 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 82088 1003 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;