RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJEB20058" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB20058 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25515983 25515983 PRJEB20058_P_NODE_173321_length_283_cov_9.387387_g170498_i0 PRJEB20058 173321 283 9.387387 26.56630521 Zoophthora radicans 42210 Fungi Fungi 523 4.5999999999999983e-144   NTclustered gi|2489628978|gb|OQ831924.1| 42210 g170498 i0 100 97.9646643109541 283 0 100 0 1 283 1878 1596 Zoophthora radicans strain ATCC 208865 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27724 523 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Zoophthora Zoophthora radicans
25517961 25517961 PRJEB20058_P_NODE_220209_length_242_cov_3.977901_g217384_i0 PRJEB20058 220209 242 3.977901 9.62652042 Neozygites floridana 164420 Fungi Fungi 169 2.07e-37   NTclustered gi|22535855|gb|AF296758.1| 164420 g217384 i0 89.552 49.7892561983471 134 13 55 1 110 242 184 317 Neozygites floridana small subunit ribosomal RNA gene, partial sequence blastn 12049 169 1 Eukaryota Opisthokonta Fungi Zoopagomycota Neozygitomycetes Neozygitales Neozygitaceae Neozygites Neozygites floridana
25649300 25649300 PRJEB20058_P_NODE_114610_length_375_cov_2.863057_g111796_i0 PRJEB20058 114610 375 2.863057 10.73646375 Rhopalomyces elegans 78913 Fungi Fungi 316 1.15e-81   NTclustered gi|82398415|gb|DQ273795.1| 78913 g111796 i0 83.38 37.6266666666667 361 41 95 14 9 364 2467 2121 Rhopalomyces elegans isolate AFTOL-ID 142 28S ribosomal RNA gene, partial sequence blastn 14110 316 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Helicocephalidaceae Rhopalomyces Rhopalomyces elegans
25923729 25923729 PRJEB20058_P_NODE_161236_length_298_cov_4.421941_g158413_i0 PRJEB20058 161236 298 4.421941 13.17738418 Neozygites parvispora 164421 Fungi Fungi 274 5.43e-69   NTclustered gi|22535857|gb|AF296760.1| 164421 g158413 i0 88.186 31.1946308724832 237 18 77 8 47 276 265 32 Neozygites parvispora small subunit ribosomal RNA gene, partial sequence blastn 9296 274 1 Eukaryota Opisthokonta Fungi Zoopagomycota Neozygitomycetes Neozygitales Neozygitaceae Neozygites Neozygites parvispora
25928752 25928752 PRJEB20058_P_NODE_53892_length_572_cov_105.749511_g51151_i0 PRJEB20058 53892 572 105.749511 604.88720292 Entomophthora muscae 34485 Fungi Fungi 422 3.73e-113   NTclustered gi|82398173|gb|DQ273772.1| 34485 g51151 i0 81.038 44.3041958041958 559 80 95 22 1 543 2231 1683 Entomophthora muscae isolate AFTOL-ID 28 28S ribosomal RNA gene, partial sequence blastn 25342 422 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae
26061887 26061887 PRJEB20058_P_NODE_213965_length_246_cov_22.583784_g211141_i0 PRJEB20058 213965 246 22.583784 55.55610864 Capillidium heterosporum 1167838 Fungi Fungi 324 4.26e-84   NTclustered gi|1583106424|ref|NC_040967.1| 1167838 g211141 i0 92.857 50.2967479674797 224 14 90 2 2 223 1047 824 Conidiobolus heterosporus strain RCEF6331 mitochondrion, complete genome blastn 12373 324 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Capillidium Capillidium heterosporum
26564569 26564569 PRJEB20058_P_NODE_123592_length_357_cov_29.905405_g120775_i0 PRJEB20058 123592 357 29.905405 106.76229585 Zoophthora 34482 Fungi Fungi 420 8.04e-113   NTclustered gi|1269236919|gb|MG253005.1| 42210 g120775 i0 88.427 65.140056022409 337 34 93 2 1 333 729 394 Zoophthora radicans isolate ARSEF:11861 small subunit ribosomal RNA gene, partial sequence blastn 23255 420 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Zoophthora Zoophthora radicans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;